Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   I6K87_RS09940 Genome accession   NZ_CP069892
Coordinates   1804195..1804530 (+) Length   111 a.a.
NCBI ID   WP_239466780.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1799195..1809530
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS08920 (I6K87_08920) - 1799872..1800933 (+) 1062 WP_204982572.1 M24 family metallopeptidase -
  I6K87_RS08925 (I6K87_08925) efp 1800992..1801552 (+) 561 WP_003026309.1 elongation factor P -
  I6K87_RS08930 (I6K87_08930) - 1801663..1802052 (+) 390 WP_006269324.1 Asp23/Gls24 family envelope stress response protein -
  I6K87_RS08935 (I6K87_08935) nusB 1802045..1802470 (+) 426 WP_003039673.1 transcription antitermination factor NusB -
  I6K87_RS08940 (I6K87_08940) comR/comR2 1802687..1803160 (+) 474 WP_059221510.1 sigma-70 family RNA polymerase sigma factor Regulator
  I6K87_RS08945 (I6K87_08945) - 1803353..1804170 (+) 818 Protein_1723 HAD family hydrolase -
  I6K87_RS09940 ccpA 1804195..1804530 (+) 336 WP_239466780.1 LacI family DNA-binding transcriptional regulator Regulator
  I6K87_RS09945 - 1804576..1804878 (+) 303 WP_239466781.1 hypothetical protein -
  I6K87_RS08955 (I6K87_08955) - 1804936..1805127 (+) 192 WP_204982573.1 hypothetical protein -
  I6K87_RS08960 (I6K87_08960) - 1805406..1806002 (+) 597 WP_204982574.1 TetR/AcrR family transcriptional regulator -
  I6K87_RS08965 (I6K87_08965) - 1805999..1806094 (+) 96 Protein_1728 NAD(P)H-dependent oxidoreductase -
  I6K87_RS08970 (I6K87_08970) - 1806183..1806647 (+) 465 WP_204982575.1 flavodoxin -

Sequence

Protein


Download         Length: 111 a.a.        Molecular weight: 12796.68 Da        Isoelectric Point: 7.3112

>NTDB_id=471059 I6K87_RS09940 WP_239466780.1 1804195..1804530(+) (ccpA) [Streptococcus anginosus strain FDAARGOS_1357]
MTNIREITKLSGYSVSSVSRVLNNHPYVSDEAREKILQIVRELDYTPNLVAKELSLGNTYKVGVVIPHVRHTYFTKLING
MLDQAQRSAYNLLLLPSQYDKELEIQYLEQL

Nucleotide


Download         Length: 336 bp        

>NTDB_id=471059 I6K87_RS09940 WP_239466780.1 1804195..1804530(+) (ccpA) [Streptococcus anginosus strain FDAARGOS_1357]
ATGACCAATATTCGAGAAATAACGAAGTTGAGTGGCTATTCGGTGTCCAGTGTGTCGCGCGTGCTTAACAATCACCCATA
TGTATCAGACGAGGCACGGGAGAAAATCCTGCAAATTGTCAGAGAACTGGACTATACTCCAAATCTAGTCGCAAAAGAAC
TGAGTTTGGGCAATACTTATAAAGTGGGTGTAGTCATTCCTCATGTGCGTCACACTTATTTTACCAAGCTCATCAACGGT
ATGTTGGATCAAGCGCAGAGAAGTGCCTATAATTTGCTGCTTTTGCCGTCTCAGTATGACAAAGAACTAGAGATTCAGTA
CCTGGAACAATTGTGA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, lacI family (LacI)

(4-48)

Periplasmic binding proteins and sugar binding domain of LacI family (Peripla_BP_1)

(60-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

38.182

99.099

0.378
  ccpA Streptococcus pneumoniae D39

37.963

97.297

0.369
  ccpA Streptococcus gordonii str. Challis substr. CH1

37.037

97.297

0.36