Detailed information    

insolico Bioinformatically predicted

Overview


Name   hexA   Type   Machinery gene
Locus tag   I6K87_RS07915 Genome accession   NZ_CP069892
Coordinates   1604936..1607497 (+) Length   853 a.a.
NCBI ID   WP_204982533.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1599936..1612497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS07895 (I6K87_07895) - 1601236..1601745 (+) 510 WP_003027812.1 ABC transporter permease -
  I6K87_RS07900 (I6K87_07900) nrdI 1601821..1602276 (+) 456 WP_003027811.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  I6K87_RS07905 (I6K87_07905) argS 1602331..1604019 (-) 1689 WP_059221617.1 arginine--tRNA ligase -
  I6K87_RS07910 (I6K87_07910) argR 1604123..1604563 (+) 441 WP_003027809.1 arginine repressor -
  I6K87_RS07915 (I6K87_07915) hexA 1604936..1607497 (+) 2562 WP_204982533.1 DNA mismatch repair protein MutS Machinery gene
  I6K87_RS07920 (I6K87_07920) - 1607686..1608144 (-) 459 WP_003027807.1 DUF3021 domain-containing protein -
  I6K87_RS07925 (I6K87_07925) brsR 1608141..1608581 (-) 441 WP_049533411.1 LytTR family DNA-binding domain-containing protein Regulator
  I6K87_RS07930 (I6K87_07930) hexB 1608846..1610792 (+) 1947 WP_049533450.1 DNA mismatch repair endonuclease MutL Machinery gene
  I6K87_RS07935 (I6K87_07935) ruvA 1610926..1611516 (+) 591 WP_204982534.1 Holliday junction branch migration protein RuvA Machinery gene
  I6K87_RS07940 (I6K87_07940) - 1611526..1612080 (+) 555 WP_049533427.1 DNA-3-methyladenine glycosylase I -
  I6K87_RS10075 - 1612085..1612171 (+) 87 Protein_1524 CPBP family intramembrane glutamate endopeptidase -

Sequence


Protein


Download         Length: 853 a.a.        Molecular weight: 96031.75 Da        Isoelectric Point: 4.9649

>NTDB_id=471033 I6K87_RS07915 WP_204982533.1 1604936..1607497(+) (hexA) [Streptococcus anginosus strain FDAARGOS_1357]
MTKEKLSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDATNAAQILEIALTSRNKNSENPIPMAGVPYHSVQQYIDVLI
EAGYKVAIAEQMEDPKKAVGVVKREVVQVITPGTVVDSSKPDSQNNFLVALDKLAGIYGLAYMDVGTGEFQVTTLSDFNM
VCGEIRNLRAREVVIGYELPEMERQVLETQMNLLLSQVETTFDDVQLLGKDLSPLEHQVAGKLLEYVHKTQLRELSHLKQ
VHHYEIKDFLQMDYSTMASLDLTENARTGKKHGSLYWLMDETKTAMGTRLLRAWIQRPLIDKERIVKRQDVVQVFLDHFF
ERSDLADSLKGVYDIERLASRVSFGKTNPKDLLQLAATLSNVPQIKGILKGIDSLVLEDLIAKLDEIPELAALIQSAISS
DAPNVITEGNIIKTGFDETLDKYRVVMRDGTSWIADIEAKERETSGINNLKIDYNKKDGYYFHVTNSQLEHVPSHFFRKA
TLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQFLAQTLATVDVLQSFATVAEKQHFVRPEFI
EQRSIQIDKGRHAVVEKVMGAQTYIPNSISMDENVNVQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLSIFDA
IFTRIGAADDLVSGQSTFMVEMMEANHAISQATENSLILFDELGRGTATYDGMALAQAIIEYIHNRTGSKTLFATHYHEL
TELSTSLTQLENVHVATLEKDGQVTFLHKIEVGPADKSYGIHVAKIAGLPNDLLTRADQILTRLESQANEKSSLGISNTL
PADAREKNQVAEQMSLFPEITESPILDELRQLDIYNMTPMEVMLAVAEMKKKL

Nucleotide


Download         Length: 2562 bp        

>NTDB_id=471033 I6K87_RS07915 WP_204982533.1 1604936..1607497(+) (hexA) [Streptococcus anginosus strain FDAARGOS_1357]
ATGACAAAAGAAAAACTATCTCCAGGAATGCAACAGTATTTAGATATAAAAAAAGATTATCCAGATGCTTTTTTGTTGTT
TCGCATGGGAGATTTTTATGAATTATTCTATGATGATGCGACCAATGCGGCACAGATTTTAGAGATTGCTCTGACTAGCC
GCAATAAAAACTCGGAAAATCCAATCCCAATGGCAGGAGTTCCTTATCATTCGGTGCAGCAATACATTGATGTCTTAATT
GAAGCAGGCTATAAAGTTGCGATTGCAGAGCAAATGGAAGATCCTAAAAAAGCGGTTGGAGTAGTCAAACGTGAAGTGGT
GCAGGTCATCACGCCGGGGACAGTAGTTGATTCTTCAAAGCCAGACAGTCAGAACAACTTTTTAGTGGCTTTAGATAAGC
TGGCAGGTATATATGGGCTGGCTTATATGGATGTGGGAACAGGTGAATTTCAAGTTACAACTCTCAGTGATTTTAACATG
GTCTGTGGAGAAATCCGAAACCTACGAGCGCGTGAAGTGGTCATAGGGTATGAATTGCCTGAAATGGAGCGTCAAGTATT
GGAGACTCAAATGAATCTCCTTTTATCGCAAGTAGAAACTACATTTGATGATGTTCAGCTACTAGGAAAGGACTTGTCGC
CGCTAGAGCACCAAGTAGCTGGAAAGTTATTAGAGTATGTTCATAAAACGCAGCTACGTGAGCTTAGTCATTTGAAACAA
GTTCATCATTATGAAATCAAAGATTTCTTGCAGATGGACTACTCAACTATGGCAAGTCTGGATTTAACAGAGAATGCTCG
GACAGGAAAGAAGCACGGTAGCCTTTATTGGTTGATGGATGAGACCAAGACAGCTATGGGAACGCGATTGTTGAGAGCGT
GGATTCAACGTCCGTTGATTGATAAAGAGCGAATCGTCAAGCGGCAGGATGTAGTGCAAGTCTTTTTAGATCATTTCTTT
GAGCGCAGTGATTTAGCAGATAGTCTCAAAGGTGTGTATGACATTGAGCGTTTAGCCAGTCGTGTTTCGTTTGGCAAGAC
CAATCCGAAAGATTTATTGCAGTTGGCAGCAACATTGAGCAATGTCCCTCAGATTAAGGGAATTTTAAAAGGAATTGACA
GCCTAGTTTTGGAAGATTTGATTGCCAAATTGGATGAAATTCCTGAATTAGCGGCCTTGATTCAGTCAGCAATTTCGTCG
GATGCTCCAAATGTCATTACAGAGGGTAATATTATTAAAACAGGTTTTGATGAAACTTTGGACAAGTATCGAGTGGTCAT
GCGAGATGGAACGAGTTGGATTGCAGATATTGAGGCGAAAGAAAGAGAAACTAGTGGAATTAACAACCTGAAGATTGATT
ACAATAAAAAAGATGGTTATTATTTCCATGTCACCAATTCCCAGCTTGAACACGTTCCCAGTCATTTTTTCCGCAAAGCA
ACTTTGAAAAATTCGGAGCGTTTTGGTACGGAAGAACTGGCTCGTATTGAAGGCGAGATGTTGGAAGCGCGTGAAAAATC
AGCTAATTTGGAATACGAGATTTTTATGCGCATTCGTGAGGAAGCTGGTAAATATATCAAACGCCTGCAATTCTTGGCGC
AAACTCTGGCAACAGTTGATGTGCTGCAAAGCTTTGCAACTGTAGCTGAAAAGCAACACTTTGTGAGACCAGAATTTATT
GAGCAGCGCTCTATCCAAATTGATAAAGGGCGGCATGCGGTTGTAGAAAAAGTTATGGGTGCACAAACCTATATTCCTAA
CAGCATTTCAATGGACGAGAATGTTAATGTTCAGCTAATTACAGGTCCAAATATGAGTGGGAAGTCAACTTATATGCGGC
AGTTAGCAATCATTGTGATTATGGCTCAAATGGGCTCTTATGTTTCAGCTGAAAGCGCTCAATTGTCGATTTTTGATGCA
ATCTTTACTCGAATTGGTGCAGCGGATGACTTGGTTTCTGGACAATCAACCTTTATGGTTGAAATGATGGAAGCGAACCA
TGCTATTTCTCAAGCAACAGAAAATTCACTCATTCTTTTCGATGAGTTAGGAAGAGGAACAGCGACCTATGATGGCATGG
CGCTTGCTCAGGCGATTATTGAGTATATTCACAATCGGACAGGCTCCAAGACACTTTTTGCGACTCACTATCACGAGTTG
ACAGAACTGTCAACTAGCTTGACACAACTAGAAAATGTCCATGTAGCAACCCTAGAAAAAGATGGTCAAGTAACATTTCT
TCATAAGATTGAAGTTGGACCTGCTGATAAATCTTATGGGATTCATGTAGCAAAAATTGCAGGTTTGCCAAATGATTTGT
TGACAAGAGCGGATCAAATATTGACACGATTAGAAAGCCAAGCAAATGAGAAGTCATCTCTTGGCATCTCTAATACATTG
CCTGCGGATGCTCGTGAAAAAAATCAAGTGGCTGAGCAGATGTCTTTATTTCCAGAAATAACCGAATCACCTATTTTAGA
CGAGTTACGTCAGTTGGACATCTATAACATGACTCCAATGGAAGTGATGTTGGCTGTGGCAGAGATGAAGAAGAAACTTT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexA Streptococcus pneumoniae R6

75.967

100

0.76

  mutS Pseudomonas stutzeri strain ATCC 17587

36.616

100

0.37