Detailed information NTG0047088

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HP2018_RS01690
• Genome accession: NC_017381
• Coordinates: 338559..339359 (+)
• Length: 266 a.a.
• NCBI ID: WP_000835226.1
• Uniprot ID: -
• Organism: Helicobacter pylori 2018
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 333559..344359

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HP2018_RS01655 (hp2018_0337)	pseH	334059..334601 (+)	543	WP_000742711.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HP2018_RS01660 (hp2018_0338)	-	334534..335472 (-)	939	WP_000833883.1	tetraacyldisaccharide 4'-kinase	-
HP2018_RS01665 (hp2018_0339)	-	335469..336251 (-)	783	WP_001168254.1	NAD+ synthase	-
HP2018_RS01675 (hp2018_0340)	ilvC	336500..337492 (+)	993	WP_001207762.1	ketol-acid reductoisomerase	-
HP2018_RS01680 (hp2018_0341)	minD	337516..338322 (+)	807	WP_001019026.1	septum site-determining protein MinD	-
HP2018_RS01685 (hp2018_0342)	minE	338319..338552 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
HP2018_RS01690 (hp2018_0343)	dprA	338559..339359 (+)	801	WP_000835226.1	DNA-processing protein DprA	Machinery gene
HP2018_RS01695 (hp2018_0344)	dprB	339356..339760 (+)	405	WP_000599202.1	Holliday junction resolvase RuvX	Machinery gene
HP2018_RS01700 (hp2018_0345)	-	339808..340125 (+)	318	WP_014536281.1	SEL1-like repeat protein	-
HP2018_RS01705 (hp2018_0346)	-	340312..340650 (+)	339	WP_000699902.1	hypothetical protein	-
HP2018_RS01710 (hp2018_0347)	-	340634..341194 (+)	561	WP_001035869.1	hypothetical protein	-
HP2018_RS01715 (hp2018_0348)	-	341352..342233 (-)	882	WP_001117181.1	RluA family pseudouridine synthase	-
HP2018_RS01720 (hp2018_0349)	recJ	342233..343783 (-)	1551	WP_000810771.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29773.71 Da
• Isoelectric Point: 8.5846

>NTDB_id=47088 HP2018_RS01690 WP_000835226.1 338559..339359(+) (dprA) [Helicobacter pylori 2018]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIVQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLGKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=47088 HP2018_RS01690 WP_000835226.1 338559..339359(+) (dprA) [Helicobacter pylori 2018]
ATGAAAAGCCATTTCCAATACAGTGCACTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATTATAGGCACAAGAAGACCCACTCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
TAACCATAAAGTGATCCAAGAAATCGTGCAAAACGGCTTGATTTTAAGCGAATACGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCTTGAACGAGAGCGACGG
CACTAATGAGCTTTTAGGAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41