Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilQ   Type   Machinery gene
Locus tag   H3L91_RS10130 Genome accession   NZ_CP059571
Coordinates   2085658..2087745 (-) Length   695 a.a.
NCBI ID   WP_007343751.1    Uniprot ID   F2BG89
Organism   Neisseria bacilliformis strain DSM 23338     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2080658..2092745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3L91_RS10110 (H3L91_10110) - 2081307..2081633 (+) 327 WP_007343747.1 pirin-like C-terminal cupin domain-containing protein -
  H3L91_RS10115 (H3L91_10115) - 2081994..2082182 (+) 189 WP_154647222.1 hypothetical protein -
  H3L91_RS10120 (H3L91_10120) - 2082351..2084228 (-) 1878 WP_007343749.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  H3L91_RS10125 (H3L91_10125) trpB 2084336..2085538 (-) 1203 WP_007343750.1 tryptophan synthase subunit beta -
  H3L91_RS10130 (H3L91_10130) pilQ 2085658..2087745 (-) 2088 WP_007343751.1 type IV pilus secretin PilQ family protein Machinery gene
  H3L91_RS10135 (H3L91_10135) - 2087775..2088284 (-) 510 WP_007343752.1 pilus assembly protein PilP -
  H3L91_RS10140 (H3L91_10140) pilO 2088281..2088916 (-) 636 WP_007343753.1 type 4a pilus biogenesis protein PilO -
  H3L91_RS10145 (H3L91_10145) - 2088918..2089580 (-) 663 WP_007343754.1 PilN domain-containing protein -
  H3L91_RS10150 (H3L91_10150) pilM 2089583..2090680 (-) 1098 WP_007343755.1 type IV pilus assembly protein PilM -

Sequence

Protein


Download         Length: 695 a.a.        Molecular weight: 75061.08 Da        Isoelectric Point: 9.8661

>NTDB_id=470878 H3L91_RS10130 WP_007343751.1 2085658..2087745(-) (pilQ) [Neisseria bacilliformis strain DSM 23338]
MKKATVFNQVIPALGLGLIGQLALAGNITDINVSAFPNNQKIVKIKFDKGVVLPKASAVGGATQLAFDFPATSLAVSQPV
FEYEDSLLNRIATAPNNGAARVLVGLNREGRYTAEVKGNEVWIHITENAAAPVQASQGQRNRQTQNAASAMIDFRKSGKG
GVVDITAPGFSGQPDIKQNSGNVTVTLKNYPLPTQAQRNLDVSDFGTPVRNIVMKRIGNDTQVVIKNQGSWASNHKVVNG
HISLDISPKLNAEEAGLQAKNKSFKGGRVSFDFQDVDVRTILQIIAKESGMNIVASDTVTGKMTLTLKDVPWDQALDLVM
QARNLDMRKSGNIINVAPRKELLARDIETLTQEREINELGPLYSRTFQLRYKNVEEFRKILKLDDSNSGSSGTSKTILSS
RGSALIDPATNTLIITDNSSILRKFEKILEELDVPARQVMVETRIVEASDGFSREIGVKFGYAGSNGKNSWGSNWANAQA
NNNTNVNASQNNTNRTWTLNPNINLPTTAATSSVALVHALSSGALALELSAQQAQNKAKVISSPRVLTQDRKEAVIESGT
EVPYQEASSSGATSTSFKKAVLGMTVTPQITPDGQIIMDIKVNKDSVNRNCGASEPCIDTKRLDTKAMVENGGTLILGGI
YEEENSEGVSKVPLLGDIPVVGNLFKSRSRNTSKKELLIFITPRIVDNVGSTLRY

Nucleotide


Download         Length: 2088 bp        

>NTDB_id=470878 H3L91_RS10130 WP_007343751.1 2085658..2087745(-) (pilQ) [Neisseria bacilliformis strain DSM 23338]
ATGAAAAAAGCAACAGTATTTAACCAAGTGATCCCGGCATTGGGTCTGGGTTTGATCGGACAGTTGGCACTTGCAGGCAA
TATCACAGATATTAATGTCTCTGCTTTTCCAAACAATCAAAAAATTGTTAAGATAAAATTTGATAAAGGCGTTGTTTTGC
CTAAGGCTTCTGCAGTAGGTGGAGCAACACAGCTGGCATTTGATTTCCCTGCTACGTCTTTGGCAGTATCCCAGCCTGTT
TTTGAATATGAAGACTCCTTGCTTAACCGGATTGCAACCGCTCCTAATAATGGTGCAGCTCGTGTTTTGGTGGGGCTGAA
TCGGGAAGGACGTTATACGGCTGAGGTAAAAGGGAATGAGGTTTGGATTCATATTACTGAAAATGCCGCTGCTCCGGTTC
AGGCCAGCCAAGGGCAGCGTAACCGCCAAACGCAAAATGCTGCTTCTGCGATGATTGATTTTAGAAAGTCGGGCAAAGGT
GGGGTTGTTGACATAACTGCTCCCGGATTTTCCGGACAGCCTGATATTAAACAGAATAGCGGTAATGTTACAGTTACGTT
GAAAAACTACCCGTTGCCCACGCAGGCGCAACGGAATTTGGATGTAAGCGATTTTGGTACACCTGTGCGCAATATCGTTA
TGAAACGTATTGGTAACGATACCCAAGTGGTTATTAAAAATCAAGGAAGCTGGGCGTCCAATCATAAGGTAGTAAACGGA
CATATATCGCTTGATATTTCTCCGAAACTGAATGCGGAAGAGGCAGGTCTGCAAGCGAAAAACAAATCATTCAAGGGGGG
GCGTGTCTCTTTTGATTTCCAAGATGTTGATGTGCGTACCATTTTACAGATTATTGCCAAAGAGTCGGGCATGAATATTG
TTGCCAGCGATACTGTTACAGGCAAGATGACACTTACGCTCAAAGACGTACCTTGGGATCAGGCTCTGGACTTGGTAATG
CAAGCCCGTAATCTTGATATGAGGAAATCCGGCAACATTATTAATGTTGCTCCGCGTAAAGAATTGCTGGCTAGAGATAT
AGAAACTCTGACTCAGGAAAGAGAAATTAATGAATTAGGACCTCTGTATTCACGTACTTTCCAGTTGCGTTATAAAAATG
TTGAAGAGTTCCGTAAGATATTGAAATTAGATGATTCAAACAGCGGTTCTTCCGGAACTAGCAAAACTATTTTGAGCAGC
CGAGGAAGCGCATTAATTGACCCGGCAACCAATACGTTGATCATTACTGACAATTCGTCCATTTTGCGGAAATTTGAGAA
AATTCTTGAAGAACTAGACGTTCCGGCACGCCAAGTAATGGTTGAGACCCGTATTGTTGAGGCTTCCGATGGGTTCTCCC
GCGAAATTGGTGTGAAATTCGGTTACGCGGGATCAAACGGTAAGAACAGTTGGGGTAGCAACTGGGCGAATGCTCAGGCT
AATAACAATACAAATGTTAATGCTAGCCAAAACAATACCAATCGTACGTGGACGCTGAATCCTAATATCAACCTGCCTAC
AACAGCAGCAACTTCCAGTGTTGCTTTGGTTCATGCTCTTTCATCCGGTGCATTGGCATTGGAATTGTCCGCCCAACAGG
CGCAAAACAAAGCGAAAGTTATTTCTTCGCCGCGCGTCTTGACGCAAGACCGCAAAGAAGCGGTCATCGAATCAGGTACG
GAAGTTCCTTACCAAGAAGCCTCTTCAAGCGGTGCGACTTCTACATCGTTCAAAAAAGCGGTTTTGGGTATGACTGTAAC
GCCGCAAATCACGCCTGACGGCCAGATTATTATGGATATTAAGGTCAATAAAGACTCGGTTAACCGTAACTGTGGCGCAT
CCGAACCCTGTATCGATACCAAGCGTTTGGATACGAAAGCGATGGTTGAAAACGGCGGGACGCTGATTCTTGGCGGTATT
TACGAGGAAGAGAACTCGGAAGGTGTCAGCAAAGTGCCGTTGTTGGGTGATATTCCTGTCGTAGGAAACCTGTTCAAGTC
CCGCTCGCGCAATACCAGCAAGAAAGAGCTGTTGATCTTTATTACCCCGCGCATCGTGGATAATGTCGGCAGCACATTGC
GTTATTGA

Domains

Predicted by InterproScan.

Bacterial type II/III secretion system short domain (Secretin_N)

(365-438)

Bacterial type II and III secretion system protein (Secretin)

(532-687)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F2BG89

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilQ Neisseria gonorrhoeae strain FA1090

51.662

100

0.537
  pilQ Neisseria meningitidis MC58

56.835

80

0.455
  pilQ Neisseria meningitidis M1080

56.835

80

0.455