Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   H3L92_RS01485 Genome accession   NZ_CP059570
Coordinates   320363..321064 (-) Length   233 a.a.
NCBI ID   WP_085365084.1    Uniprot ID   A0A1X3DFW0
Organism   Neisseria dentiae strain DSM 19151     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 315363..326064
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3L92_RS01455 (H3L92_01455) - 315375..315827 (+) 453 WP_085365090.1 cell surface protein -
  H3L92_RS01460 (H3L92_01460) - 315850..316905 (+) 1056 WP_085365089.1 glycosyltransferase family 4 protein -
  H3L92_RS01465 (H3L92_01465) gmhB 316918..317487 (+) 570 WP_085365088.1 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase -
  H3L92_RS01470 (H3L92_01470) - 317739..318473 (+) 735 WP_085365087.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  H3L92_RS01475 (H3L92_01475) - 318496..319179 (+) 684 WP_085365086.1 M48 family metallopeptidase -
  H3L92_RS01480 (H3L92_01480) - 319344..320171 (-) 828 WP_085365085.1 undecaprenyl-diphosphate phosphatase -
  H3L92_RS01485 (H3L92_01485) dsbA1 320363..321064 (-) 702 WP_085365084.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  H3L92_RS01490 (H3L92_01490) - 321084..321893 (-) 810 WP_085365083.1 SPOR domain-containing protein -
  H3L92_RS01495 (H3L92_01495) comM 322006..323496 (-) 1491 WP_085365082.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  H3L92_RS01500 (H3L92_01500) - 323523..323798 (-) 276 WP_085365081.1 accessory factor UbiK family protein -
  H3L92_RS01505 (H3L92_01505) - 324184..324651 (-) 468 WP_085365080.1 low molecular weight protein-tyrosine-phosphatase -
  H3L92_RS01510 (H3L92_01510) - 324648..325739 (-) 1092 WP_085365079.1 conjugal transfer protein -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 25324.30 Da        Isoelectric Point: 9.9596

>NTDB_id=470817 H3L92_RS01485 WP_085365084.1 320363..321064(-) (dsbA1) [Neisseria dentiae strain DSM 19151]
MKLKSILLAAAAAFGLAANAHAATEGTDYTVLPKPIPQLQADKIEVLEFFGYFCVHCYHLDPVLLKHAKTFPADTYLRTE
HVVWQPEMLGLARVAAAVNSSGLKYQANPEVFKAVYEQKINLADTATFKQWAESQKGFDGKKLIAAYDSFGNPAQAKKME
ELTNTYQISGTPTVIVGGKYQVKFTGDWNAGMKTINELVAKVRSERGMKAPAAKKAVPALKSKGASIAKSANK

Nucleotide


Download         Length: 702 bp        

>NTDB_id=470817 H3L92_RS01485 WP_085365084.1 320363..321064(-) (dsbA1) [Neisseria dentiae strain DSM 19151]
ATGAAACTGAAAAGCATTTTACTGGCCGCCGCGGCAGCATTCGGCTTGGCCGCCAACGCCCATGCGGCAACCGAAGGCAC
CGACTACACCGTTCTGCCCAAGCCGATTCCCCAGCTTCAGGCCGACAAAATCGAAGTGCTCGAATTTTTCGGTTATTTCT
GCGTGCATTGCTACCATCTCGACCCGGTGCTGCTGAAACATGCCAAAACTTTCCCTGCCGATACCTATCTGCGCACCGAA
CACGTTGTTTGGCAGCCCGAAATGCTGGGCTTGGCGCGCGTAGCCGCCGCAGTGAACAGCTCCGGCCTGAAATACCAGGC
CAACCCCGAGGTGTTTAAAGCCGTTTACGAGCAGAAAATCAACCTGGCCGACACGGCCACATTCAAGCAGTGGGCCGAAA
GCCAGAAGGGCTTCGACGGCAAGAAACTGATTGCCGCTTACGATTCGTTCGGCAACCCCGCCCAAGCCAAAAAAATGGAA
GAGCTGACCAACACCTACCAAATCAGCGGCACGCCCACCGTGATCGTGGGCGGCAAATACCAGGTGAAATTCACCGGCGA
CTGGAACGCCGGCATGAAAACCATTAACGAGTTGGTGGCCAAAGTGCGCAGCGAGCGCGGCATGAAAGCGCCGGCCGCTA
AAAAAGCCGTTCCGGCACTGAAAAGCAAGGGCGCGTCGATTGCCAAGTCTGCCAACAAATAA

Domains

Predicted by InterproScan.

DSBA-like thioredoxin domain (DSBA)

(85-182)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X3DFW0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

52.402

98.283

0.515
  dsbA2 Neisseria meningitidis MC58

62.637

78.112

0.489