Detailed information NTG0047067

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPPN135_RS01660
• Genome accession: NC_017379
• Coordinates: 335502..336302 (+)
• Length: 266 a.a.
• NCBI ID: WP_000841115.1
• Uniprot ID: -
• Organism: Helicobacter pylori Puno135
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 330502..341302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPPN135_RS01625 (HPPN135_01675)	pseH	331002..331544 (+)	543	WP_000742643.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPPN135_RS01630 (HPPN135_01680)	-	331477..332415 (-)	939	WP_000833922.1	tetraacyldisaccharide 4'-kinase	-
HPPN135_RS01635 (HPPN135_01685)	-	332412..333194 (-)	783	WP_001188499.1	NAD+ synthase	-
HPPN135_RS01645 (HPPN135_01690)	ilvC	333443..334435 (+)	993	WP_001207782.1	ketol-acid reductoisomerase	-
HPPN135_RS01650 (HPPN135_01695)	minD	334454..335260 (+)	807	WP_001019041.1	septum site-determining protein MinD	-
HPPN135_RS01655 (HPPN135_01700)	minE	335257..335490 (+)	234	WP_000051428.1	cell division topological specificity factor MinE	-
HPPN135_RS01660 (HPPN135_01705)	dprA	335502..336302 (+)	801	WP_000841115.1	DNA-processing protein DprA	Machinery gene
HPPN135_RS01665 (HPPN135_01710)	dprB	336299..336703 (+)	405	WP_000599190.1	Holliday junction resolvase RuvX	Machinery gene
HPPN135_RS08045 (HPPN135_01715)	-	336762..337982 (+)	1221	WP_000901347.1	SEL1-like repeat protein	-
HPPN135_RS01680 (HPPN135_01720)	-	338171..338509 (+)	339	WP_000699910.1	hypothetical protein	-
HPPN135_RS01685 (HPPN135_01725)	-	338493..339053 (+)	561	WP_000037131.1	hypothetical protein	-
HPPN135_RS01690	-	339065..339397 (+)	333	WP_042356923.1	glycoside hydrolase family protein	-
HPPN135_RS08480	-	339482..339646 (+)	165	WP_228921320.1	lysozyme	-
HPPN135_RS01705 (HPPN135_01750)	-	340067..340452 (+)	386	Protein_325	DUF1294 domain-containing protein	-
HPPN135_RS01710 (HPPN135_01755)	-	340452..341237 (+)	786	WP_000458571.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29751.60 Da
• Isoelectric Point: 8.2376

>NTDB_id=47067 HPPN135_RS01660 WP_000841115.1 335502..336302(+) (dprA) [Helicobacter pylori Puno135]
MKSNFQYSALENIPKAFDTLKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQHLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=47067 HPPN135_RS01660 WP_000841115.1 335502..336302(+) (dprA) [Helicobacter pylori Puno135]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAACATCCCTAAAGCCTTTGACACTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGTGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCTTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCACCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTGGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41