Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | HPPN135_RS01665 | Genome accession | NC_017379 |
| Coordinates | 336299..336703 (+) | Length | 134 a.a. |
| NCBI ID | WP_000599190.1 | Uniprot ID | - |
| Organism | Helicobacter pylori Puno135 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 331299..341703
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPPN135_RS01630 (HPPN135_01680) | - | 331477..332415 (-) | 939 | WP_000833922.1 | tetraacyldisaccharide 4'-kinase | - |
| HPPN135_RS01635 (HPPN135_01685) | - | 332412..333194 (-) | 783 | WP_001188499.1 | NAD+ synthase | - |
| HPPN135_RS01645 (HPPN135_01690) | ilvC | 333443..334435 (+) | 993 | WP_001207782.1 | ketol-acid reductoisomerase | - |
| HPPN135_RS01650 (HPPN135_01695) | minD | 334454..335260 (+) | 807 | WP_001019041.1 | septum site-determining protein MinD | - |
| HPPN135_RS01655 (HPPN135_01700) | minE | 335257..335490 (+) | 234 | WP_000051428.1 | cell division topological specificity factor MinE | - |
| HPPN135_RS01660 (HPPN135_01705) | dprA | 335502..336302 (+) | 801 | WP_000841115.1 | DNA-processing protein DprA | Machinery gene |
| HPPN135_RS01665 (HPPN135_01710) | dprB | 336299..336703 (+) | 405 | WP_000599190.1 | Holliday junction resolvase RuvX | Machinery gene |
| HPPN135_RS08045 (HPPN135_01715) | - | 336762..337982 (+) | 1221 | WP_000901347.1 | SEL1-like repeat protein | - |
| HPPN135_RS01680 (HPPN135_01720) | - | 338171..338509 (+) | 339 | WP_000699910.1 | hypothetical protein | - |
| HPPN135_RS01685 (HPPN135_01725) | - | 338493..339053 (+) | 561 | WP_000037131.1 | hypothetical protein | - |
| HPPN135_RS01690 | - | 339065..339397 (+) | 333 | WP_042356923.1 | glycoside hydrolase family protein | - |
| HPPN135_RS08480 | - | 339482..339646 (+) | 165 | WP_228921320.1 | lysozyme | - |
| HPPN135_RS01705 (HPPN135_01750) | - | 340067..340452 (+) | 386 | Protein_325 | DUF1294 domain-containing protein | - |
| HPPN135_RS01710 (HPPN135_01755) | - | 340452..341237 (+) | 786 | WP_000458571.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15210.71 Da Isoelectric Point: 9.4972
>NTDB_id=47068 HPPN135_RS01665 WP_000599190.1 336299..336703(+) (dprB) [Helicobacter pylori Puno135]
MILACDVGLKRIGIAALLNGVILPLEAILRQNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEYFIKLLDFKGE
IVFINEDRSSIEAYENLGHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNR
MILACDVGLKRIGIAALLNGVILPLEAILRQNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEYFIKLLDFKGE
IVFINEDRSSIEAYENLGHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNR
Nucleotide
Download Length: 405 bp
>NTDB_id=47068 HPPN135_RS01665 WP_000599190.1 336299..336703(+) (dprB) [Helicobacter pylori Puno135]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGGATCGCTGCGCTTTTAAACGGCGTTATTTTACCTTTAGAAGC
GATTTTACGCCAAAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGTTGGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGACACGAACGCGCGCATTGAATATTTCATCAAACTTTTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGGGCATTTGGGTAAGAAAAACAAGAGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGTAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTGAAAAATC
GCTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGGATCGCTGCGCTTTTAAACGGCGTTATTTTACCTTTAGAAGC
GATTTTACGCCAAAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGTTGGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGACACGAACGCGCGCATTGAATATTTCATCAAACTTTTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGGGCATTTGGGTAAGAAAAACAAGAGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGTAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTGAAAAATC
GCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
94.776 |
100 |
0.948 |