Detailed information NTG0470493

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: H2789_RS04365
• Genome accession: NZ_CP059549
• Coordinates: 917144..919576 (+)
• Length: 810 a.a.
• NCBI ID: WP_347019637.1
• Uniprot ID: -
• Organism: Acinetobacter calcoaceticus strain NCIMB13260
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	916374..924258	917144..919576	within	0

Gene organization within MGE regions

Location: 916374..924258

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H2789_RS04360 (H2789_04400)	-	916374..917060 (+)	687	WP_004643715.1	ATP-binding cassette domain-containing protein	-
H2789_RS04365 (H2789_04405)	comA/comEC	917144..919576 (+)	2433	WP_347019637.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
H2789_RS04370 (H2789_04410)	-	919529..920512 (-)	984	WP_347019638.1	lysophospholipid acyltransferase family protein	-
H2789_RS04375 (H2789_04415)	sppA	920645..921661 (+)	1017	WP_347019639.1	signal peptide peptidase SppA	-
H2789_RS04380 (H2789_04420)	-	921683..922492 (+)	810	WP_080027613.1	alpha/beta hydrolase	-
H2789_RS04385 (H2789_04425)	purN	922562..923191 (-)	630	WP_347019640.1	phosphoribosylglycinamide formyltransferase	-
H2789_RS04390 (H2789_04430)	purM	923188..924258 (-)	1071	WP_005038840.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92511.94 Da
• Isoelectric Point: 9.3008

>NTDB_id=470493 H2789_RS04365 WP_347019637.1 917144..919576(+) (comA/comEC) [Acinetobacter calcoaceticus strain NCIMB13260]
MLKLILVGWVVGIAFMGIDLPLIMQYGWIGKVLLFICLIFYIFKRHIVVNRPILKGVYYLICGLSLFVLGHQYAQHALNE
RLQLREMQPESLDIVVYIDRISEEKDNKTQQLAQVLGRSSHVVNWLLYLKNENEKALIEGPKLQLGHYYRISGKTRPAHS
YAVSGAFDQEQWFIQRNIMSGFNVQHIEPLSSDEIYRLGYQNHLQQQQKFFTRQQLNIEKLRLKFRLMLKKSPLQNKGLL
LALLTGDESLLNEQIKNQFKQLGISHLLAISGPHVLIFAILLSWGLHQLVRRYYPQIYLWQPKQILAMIPLCFGVLIYTA
FVGFEIPALRTLLSVFLFAFLLFVKLPVKPFSLLVYSASLLLLFDPFSVLSAGFWLSYGSCFILLRIYQTIVQTPNLASV
SLLSRIILLSKTLIESQSKIFIALCPLMLIFFQQISWVAPLTNIIAVPLLGGIIVPLNIFAACVWLIFNSIGNALFQIND
ILLSIVLTCFSFLEKLSLSLQGFSLTPLALLGLSCAIIILFLPRGVLPKSWSLICCLPLVIPNKTSQQIQLNIIDVGQGQ
SIFLQHPEQTWLIDTGGSYDEKAFSIGQNVVIPYLRQKGIKQLDHVVLSHLDQDHSGAFPAISQAFPIKQVISNELWKEQ
VKEPFTYCHQGQKWQYPQLDIEILWPKENDLNLVSSNQNQYSCVVYIHLKQIKGYQNYLIMGDAGWEAEYQLIKEYPDLK
VDVLVLGHHGSKHSSAYDFLATLNPKLVVASAGFNNRYGHPSKEVIARIQALNIPFKSTIEQGTLSFVSQNHQMALYTRR
FERTWLHRTL

Nucleotide

• Length: 2433 bp

>NTDB_id=470493 H2789_RS04365 WP_347019637.1 917144..919576(+) (comA/comEC) [Acinetobacter calcoaceticus strain NCIMB13260]
ATGTTAAAGCTTATTTTAGTGGGGTGGGTTGTAGGTATTGCATTTATGGGAATAGATCTTCCTTTAATAATGCAATATGG
TTGGATTGGTAAAGTTCTGCTCTTTATCTGCTTAATTTTTTATATTTTTAAGCGGCATATTGTTGTAAATCGACCTATAT
TAAAAGGAGTTTATTATTTAATCTGTGGTCTAAGCCTTTTTGTTCTAGGTCATCAATATGCTCAGCATGCCTTAAATGAA
AGATTACAACTACGGGAGATGCAACCTGAGTCTTTAGACATTGTTGTGTATATAGACCGAATAAGTGAAGAAAAAGATAA
TAAGACACAGCAACTTGCTCAGGTTCTAGGGCGGTCATCCCATGTAGTCAATTGGCTATTATATTTAAAAAATGAAAATG
AGAAGGCATTGATAGAGGGGCCAAAATTACAATTAGGCCACTACTATCGGATTTCGGGTAAAACCAGACCAGCTCATAGT
TACGCAGTATCAGGTGCTTTTGATCAGGAACAATGGTTCATTCAACGAAATATAATGTCAGGTTTCAATGTTCAGCATAT
TGAACCTTTAAGCTCTGATGAAATTTATCGATTGGGTTATCAAAATCATTTACAACAGCAACAAAAGTTTTTTACTAGAC
AACAATTAAATATAGAAAAATTGCGCCTAAAATTTAGATTGATGCTAAAAAAATCTCCCTTACAGAACAAAGGACTGTTA
TTAGCACTTCTAACAGGAGATGAAAGTCTTTTAAATGAACAGATTAAAAATCAATTTAAGCAGTTAGGAATCTCTCATTT
GTTGGCCATTTCAGGGCCTCATGTTCTCATTTTTGCAATCTTGTTATCTTGGGGATTACATCAATTAGTACGACGTTATT
ATCCGCAGATTTATTTATGGCAACCCAAGCAAATATTGGCAATGATTCCGTTATGTTTTGGGGTTTTGATTTATACCGCA
TTTGTAGGCTTTGAAATTCCAGCCTTAAGAACTTTACTTTCAGTATTTTTATTTGCCTTTTTATTGTTTGTTAAACTGCC
TGTTAAACCATTTTCGCTCTTGGTTTACAGTGCAAGTCTACTTTTGCTTTTCGATCCATTTAGTGTCTTATCGGCAGGTT
TTTGGCTATCTTATGGTTCTTGCTTTATTTTATTGCGCATTTATCAAACCATAGTACAGACTCCAAATCTCGCTTCAGTG
AGTCTGCTATCTAGAATAATTCTTTTAAGTAAAACCCTCATTGAATCTCAGAGCAAAATATTTATCGCTCTATGTCCTTT
AATGCTGATTTTCTTTCAACAAATTTCATGGGTCGCACCTCTCACAAATATTATTGCAGTTCCTTTGCTAGGAGGAATTA
TTGTTCCTTTGAATATTTTTGCTGCTTGTGTGTGGCTTATTTTTAATTCAATTGGAAATGCACTCTTTCAGATTAATGAT
ATTTTGCTCAGTATAGTGCTGACATGTTTTAGTTTTTTAGAGAAGTTATCTCTATCGTTGCAAGGTTTTAGCCTGACACC
ACTTGCTTTGTTAGGCTTAAGCTGTGCCATTATTATTTTATTTTTACCGCGTGGTGTTTTACCGAAATCTTGGAGTCTTA
TATGTTGTTTACCCTTAGTCATTCCGAATAAAACCTCTCAGCAAATTCAATTAAATATTATAGATGTAGGCCAAGGCCAA
TCTATTTTTTTACAACATCCAGAGCAGACATGGTTAATTGATACTGGCGGTTCTTATGATGAGAAGGCTTTTAGTATTGG
TCAAAATGTAGTGATCCCATATTTACGTCAGAAAGGTATTAAACAATTAGATCATGTGGTGTTATCTCATCTTGACCAAG
ATCATAGTGGTGCATTTCCGGCGATAAGTCAGGCTTTTCCTATCAAACAAGTCATATCGAATGAGTTGTGGAAAGAGCAG
GTTAAAGAACCATTTACTTATTGTCATCAGGGGCAAAAATGGCAATATCCCCAGTTAGATATTGAGATACTTTGGCCTAA
AGAAAATGATTTAAATTTAGTTTCTTCAAATCAAAATCAATACTCTTGTGTCGTTTATATTCATTTAAAACAGATAAAAG
GTTACCAAAACTATTTAATTATGGGGGATGCCGGATGGGAAGCTGAATATCAATTGATAAAAGAATATCCTGATTTAAAA
GTAGATGTTTTGGTATTGGGTCATCATGGTAGTAAACATAGTTCTGCCTATGACTTCTTAGCGACTTTAAATCCCAAGCT
TGTTGTTGCATCTGCCGGTTTTAATAACAGATACGGTCATCCAAGCAAAGAGGTGATAGCGAGAATACAAGCACTTAATA
TTCCTTTTAAAAGTACAATTGAGCAAGGAACATTAAGTTTTGTATCTCAGAATCATCAAATGGCTTTATACACTCGACGT
TTTGAGCGTACTTGGCTTCACAGAACTTTGTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-640)

• Competence protein (Competence) (243-522)

• Domain of unknown function (DUF4131) (DUF4131) (29-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	71.04	99.753	0.709
comA/comEC	Acinetobacter baumannii strain A118	70.173	99.753	0.7
comA/comEC	Acinetobacter baylyi ADP1	49.075	100	0.491