Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H2789_RS03210 Genome accession   NZ_CP059549
Coordinates   654375..654758 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter calcoaceticus strain NCIMB13260     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 649375..659758
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2789_RS03200 (H2789_03190) - 652273..653382 (-) 1110 WP_347020196.1 efflux RND transporter periplasmic adaptor subunit -
  H2789_RS03205 (H2789_03195) - 653451..654089 (-) 639 WP_347019539.1 hypothetical protein -
  H2789_RS03210 (H2789_03200) pilG 654375..654758 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  H2789_RS03215 (H2789_03205) - 654782..655144 (+) 363 WP_005036319.1 response regulator -
  H2789_RS03220 (H2789_03210) - 655204..655740 (+) 537 WP_005309806.1 chemotaxis protein CheW -
  H2789_RS03225 (H2789_03215) - 655783..657864 (+) 2082 WP_347019540.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=470491 H2789_RS03210 WP_000389061.1 654375..654758(+) (pilG) [Acinetobacter calcoaceticus strain NCIMB13260]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=470491 H2789_RS03210 WP_000389061.1 654375..654758(+) (pilG) [Acinetobacter calcoaceticus strain NCIMB13260]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTAATTGATGACTCAAAAACCATTCGCCGTACAGCCGAAACTTTATT
ACAGCGAGAAGGCTGTGAAGTGATTACTGCGGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCAGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGCGCTTTGATTAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCACGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37