Detailed information NTG0047045

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPPN120_RS01645
• Genome accession: NC_017378
• Coordinates: 336370..337170 (+)
• Length: 266 a.a.
• NCBI ID: WP_000841125.1
• Uniprot ID: -
• Organism: Helicobacter pylori Puno120
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 331370..342170

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPPN120_RS01610 (HPPN120_01665)	pseH	331867..332409 (+)	543	WP_000742642.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPPN120_RS01615 (HPPN120_01670)	-	332342..333280 (-)	939	WP_000833954.1	tetraacyldisaccharide 4'-kinase	-
HPPN120_RS01620 (HPPN120_01675)	-	333277..334059 (-)	783	WP_001168227.1	NAD+ synthase	-
HPPN120_RS01630 (HPPN120_01680)	ilvC	334306..335298 (+)	993	WP_001207781.1	ketol-acid reductoisomerase	-
HPPN120_RS01635 (HPPN120_01685)	minD	335322..336128 (+)	807	WP_001019076.1	septum site-determining protein MinD	-
HPPN120_RS01640 (HPPN120_01690)	minE	336125..336358 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HPPN120_RS01645 (HPPN120_01695)	dprA	336370..337170 (+)	801	WP_000841125.1	DNA-processing protein DprA	Machinery gene
HPPN120_RS01650 (HPPN120_01700)	dprB	337167..337571 (+)	405	WP_000599259.1	Holliday junction resolvase RuvX	Machinery gene
HPPN120_RS01655 (HPPN120_01710)	-	337703..338278 (+)	576	WP_000840154.1	tetratricopeptide repeat protein	-
HPPN120_RS01660 (HPPN120_01715)	-	338472..338810 (+)	339	WP_000699916.1	hypothetical protein	-
HPPN120_RS01665 (HPPN120_01720)	-	338794..339354 (+)	561	WP_000037129.1	hypothetical protein	-
HPPN120_RS01670	-	339366..339692 (+)	327	WP_041200296.1	glycoside hydrolase family protein	-
HPPN120_RS08530	-	339776..340043 (+)	268	Protein_323	lysozyme	-
HPPN120_RS01680 (HPPN120_01740)	-	340353..340734 (+)	382	Protein_324	DUF1294 domain-containing protein	-
HPPN120_RS01685 (HPPN120_01745)	-	340734..341519 (+)	786	WP_014536872.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29788.68 Da
• Isoelectric Point: 8.5925

>NTDB_id=47045 HPPN120_RS01645 WP_000841125.1 336370..337170(+) (dprA) [Helicobacter pylori Puno120]
MKSNFQYSALENTPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=47045 HPPN120_RS01645 WP_000841125.1 336370..337170(+) (dprA) [Helicobacter pylori Puno120]
ATGAAAAGCAACTTCCAATACAGCGCACTAGAGAATACCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGTGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTACGAAGAGGCGTAT
CTCAAATTTGGGGATAAACTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414