Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   JR441_RS16110 Genome accession   NZ_CP069789
Coordinates   3122629..3123492 (-) Length   287 a.a.
NCBI ID   WP_043858576.1    Uniprot ID   A8D459
Organism   Bacillus subtilis strain BIM B-569G     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3117629..3128492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JR441_RS16075 (JR441_16075) mrpE 3117825..3118301 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  JR441_RS16080 (JR441_16080) mrpF 3118301..3118585 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  JR441_RS16085 (JR441_16085) mnhG 3118569..3118943 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  JR441_RS16090 (JR441_16090) yuxO 3118982..3119362 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  JR441_RS16095 (JR441_16095) comA 3119381..3120025 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  JR441_RS16100 (JR441_16100) - 3120106..3122390 (-) 2285 Protein_3132 histidine kinase -
  JR441_RS16105 (JR441_16105) comX 3122406..3122627 (-) 222 WP_014480704.1 competence pheromone ComX -
  JR441_RS16110 (JR441_16110) comQ 3122629..3123492 (-) 864 WP_043858576.1 polyprenyl synthetase family protein Regulator
  JR441_RS16115 (JR441_16115) degQ 3123677..3123817 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  JR441_RS16120 (JR441_16120) - 3124039..3124164 (+) 126 WP_121549029.1 hypothetical protein -
  JR441_RS16125 (JR441_16125) - 3124279..3124647 (+) 369 WP_038427878.1 hypothetical protein -
  JR441_RS16130 (JR441_16130) pdeH 3124623..3125852 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  JR441_RS16135 (JR441_16135) pncB 3125989..3127461 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  JR441_RS16140 (JR441_16140) pncA 3127477..3128028 (-) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32760.38 Da        Isoelectric Point: 4.9534

>NTDB_id=470264 JR441_RS16110 WP_043858576.1 3122629..3123492(-) (comQ) [Bacillus subtilis strain BIM B-569G]
MKEIVDENILNEDLKVKLISFIEEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGECNETVEEYSRYLGVVEQIANDHYGLYYPNNNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=470264 JR441_RS16110 WP_043858576.1 3122629..3123492(-) (comQ) [Bacillus subtilis strain BIM B-569G]
ATGAAGGAGATTGTAGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCGAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAGGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATGTAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTGTAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACAATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(46-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8D459

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.286

97.561

0.432