Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   H2N97_RS15770 Genome accession   NZ_CP059497
Coordinates   3184901..3187210 (-) Length   769 a.a.
NCBI ID   WP_087634938.1    Uniprot ID   -
Organism   Bacillus velezensis strain JSRB 08     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3179901..3192210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2N97_RS15730 (H2N97_15730) - 3180361..3180792 (+) 432 WP_087634939.1 Na(+)/H(+) antiporter subunit B -
  H2N97_RS15735 (H2N97_15735) - 3180792..3181133 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  H2N97_RS15740 (H2N97_15740) - 3181126..3182607 (+) 1482 WP_017419418.1 Na+/H+ antiporter subunit D -
  H2N97_RS15745 (H2N97_15745) - 3182613..3183089 (+) 477 WP_017419419.1 Na+/H+ antiporter subunit E -
  H2N97_RS15750 (H2N97_15750) - 3183089..3183373 (+) 285 WP_017419420.1 Na(+)/H(+) antiporter subunit F1 -
  H2N97_RS15755 (H2N97_15755) mnhG 3183357..3183731 (+) 375 WP_017419421.1 monovalent cation/H(+) antiporter subunit G -
  H2N97_RS15760 (H2N97_15760) - 3183771..3184154 (-) 384 WP_017419422.1 hotdog fold thioesterase -
  H2N97_RS15765 (H2N97_15765) comA 3184176..3184820 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  H2N97_RS15770 (H2N97_15770) comP 3184901..3187210 (-) 2310 WP_087634938.1 histidine kinase Regulator
  H2N97_RS15775 (H2N97_15775) - 3187230..3187406 (-) 177 WP_087634937.1 competence pheromone ComX -
  H2N97_RS15780 (H2N97_15780) comQ 3187406..3188344 (-) 939 WP_271243340.1 class 1 isoprenoid biosynthesis enzyme Regulator
  H2N97_RS15785 (H2N97_15785) degQ 3188475..3188615 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  H2N97_RS15790 (H2N97_15790) - 3189080..3189421 (+) 342 WP_014418765.1 hypothetical protein -
  H2N97_RS15795 (H2N97_15795) - 3189428..3190651 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 769 a.a.        Molecular weight: 89202.48 Da        Isoelectric Point: 8.2927

>NTDB_id=470234 H2N97_RS15770 WP_087634938.1 3184901..3187210(-) (comP) [Bacillus velezensis strain JSRB 08]
MKNFIKQFTISVIILSLVYVCYVSYININGIIIGTKVIENKNKQFQVIEMSETSYGKFVGLEKGDIILKINNEKPSAKFL
KGDNLSHIKSLDVSRNGKQIHLDDFDIVNLDKSYSFFVFVLPLVFYFLSIVCIFYILKVNQTRKSFAGYILILFLLDISI
AYISAGGPFRGHSFNRYVNLFTFIASPIFYLQFIQQYFEELGKKFANRLINFLYIFPIFNIIMEFFRKKLPFDNIITNLN
LISFFLVTLSGFVLVFYHLYKYKYSEHAYILKVLILTNTLSFAPFLLFYVVPNILTGDYIFPALASASLLVLIPFGLVYQ
FVANKIFDIEFILGRMRYYTLLAVIPTLVIVGVLSVWAGTDELQMNPIRQTVFIFIVMFAVFYFKEIIDFKFRLKRFSEK
FNYQDSIFKYTQFIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILFHDKKDNEPDWEMYSKEFKKVTSEIGKI
IELNRGFLIKIGERGGSSYVLLCLSTINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKL
MFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYD
LGLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDG
VGCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=470234 H2N97_RS15770 WP_087634938.1 3184901..3187210(-) (comP) [Bacillus velezensis strain JSRB 08]
GTGAAAAACTTTATTAAACAATTCACTATTTCAGTTATTATCTTAAGCCTCGTTTATGTTTGCTATGTTTCTTATATAAA
CATAAATGGGATTATAATCGGAACAAAAGTTATTGAAAACAAAAACAAACAATTCCAAGTAATAGAGATGTCAGAAACTT
CTTACGGGAAATTCGTAGGTTTAGAAAAAGGCGACATCATTCTAAAAATCAACAATGAAAAACCATCTGCTAAATTTTTA
AAAGGGGATAATCTTAGTCATATCAAAAGTTTAGATGTGAGCAGAAATGGAAAGCAAATTCATTTAGATGATTTTGATAT
TGTCAATTTAGACAAATCCTATAGCTTTTTTGTATTCGTTCTTCCACTTGTGTTTTATTTTTTAAGTATAGTATGTATAT
TTTACATTCTAAAGGTGAATCAAACAAGAAAATCGTTTGCGGGATACATTTTAATTTTGTTCTTGTTAGATATTTCAATT
GCTTATATAAGCGCAGGAGGACCATTTAGAGGACATTCATTTAACAGATATGTCAATTTGTTCACATTTATAGCTTCTCC
TATATTTTATCTTCAGTTCATACAACAATATTTTGAGGAATTAGGAAAGAAGTTTGCAAATCGTCTAATCAATTTCTTAT
ATATATTCCCGATTTTTAATATTATCATGGAGTTTTTTCGTAAGAAATTACCTTTTGACAACATTATAACAAACCTTAAT
CTTATCTCGTTTTTTCTCGTTACTCTTTCAGGTTTTGTTCTCGTGTTCTATCACTTATATAAATATAAATATTCAGAGCA
TGCTTATATTTTGAAAGTTTTAATTCTGACAAATACACTTTCTTTTGCTCCATTTTTACTTTTTTACGTCGTACCTAATA
TTTTAACTGGTGATTATATCTTTCCAGCACTGGCATCAGCCTCATTGCTTGTTCTTATTCCATTTGGATTAGTATATCAG
TTTGTTGCAAATAAAATATTTGATATAGAATTTATATTAGGAAGAATGAGATATTATACTTTACTGGCTGTAATCCCAAC
GCTAGTTATTGTCGGAGTTTTATCGGTCTGGGCGGGAACAGATGAGCTTCAAATGAATCCTATTAGACAGACTGTTTTCA
TCTTTATCGTAATGTTTGCTGTATTTTACTTTAAAGAAATAATAGATTTTAAATTTCGTTTAAAACGTTTTTCTGAAAAA
TTTAATTATCAAGATAGTATATTCAAATATACCCAGTTTATCAGAAGTATAACATCTTTAAAACAAATGTTTAAAGAACT
AAAAAAGACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATTTC
ATGATAAAAAGGATAATGAGCCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGAAAAATC
ATTGAGCTAAACCGCGGTTTTTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCACTAT
TAATACACCGAGACTGACACGAGATGAGATTTCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATG
TGATACAGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTG
ATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTT
GAAGCGCCAGTGTGAACTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCCTGCCACATAGAGGTGCAGGACAAGCTTCATC
AGATGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGAT
TTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGG
CCGGTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGA
AGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGT
GTCGGATGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGTGTCCGGGCGCT
TGACGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(569-638)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

75.616

100

0.758