Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   H2R00_RS19770 Genome accession   NZ_CP059494
Coordinates   3994072..3996384 (+) Length   770 a.a.
NCBI ID   WP_182070142.1    Uniprot ID   -
Organism   Bacillus haynesii strain P19     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3989072..4001384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2R00_RS19745 - 3990577..3991797 (+) 1221 WP_182070139.1 HDOD domain-containing protein -
  H2R00_RS19750 - 3991839..3992186 (-) 348 WP_244958258.1 hypothetical protein -
  H2R00_RS19755 degQ 3992672..3992812 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  H2R00_RS19760 - 3993002..3993883 (+) 882 WP_182070141.1 polyprenyl synthetase family protein -
  H2R00_RS19765 comX 3993887..3994060 (+) 174 WP_176276343.1 competence pheromone ComX -
  H2R00_RS19770 comP 3994072..3996384 (+) 2313 WP_182070142.1 ATP-binding protein Regulator
  H2R00_RS19775 comA 3996471..3997109 (+) 639 WP_003184849.1 response regulator transcription factor Regulator
  H2R00_RS19780 - 3997126..3997515 (+) 390 WP_154999191.1 hotdog fold thioesterase -
  H2R00_RS19785 mnhG 3997554..3997928 (-) 375 WP_075751277.1 monovalent cation/H(+) antiporter subunit G -
  H2R00_RS19790 - 3997912..3998196 (-) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  H2R00_RS19795 - 3998196..3998672 (-) 477 WP_154999192.1 Na+/H+ antiporter subunit E -
  H2R00_RS19800 - 3998678..4000156 (-) 1479 WP_154999193.1 Na+/H+ antiporter subunit D -
  H2R00_RS19805 - 4000149..4000490 (-) 342 WP_154999194.1 Na(+)/H(+) antiporter subunit C -
  H2R00_RS19810 - 4000490..4000921 (-) 432 WP_154999195.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 770 a.a.        Molecular weight: 88490.73 Da        Isoelectric Point: 7.0299

>NTDB_id=470095 H2R00_RS19770 WP_182070142.1 3994072..3996384(+) (comP) [Bacillus haynesii strain P19]
MKSSLKFISILLVLLSFVYSIYICYLCFNNAFEGAKLKYSSHNQLVVIEVEEHSLAEYAGLKKGDILLEIDGKSITKKRE
PAEDILSWAYSVTVKRDAEVVDINTKETFLGYDIFFVFLIPVTFYLLCLFCIFFILNSSRSKKLFSSTFLLIAFLLNVSI
AYLSAGGVSRGDVFSRYVNLLTFLSVPVSYLHFVYQYFKEKGKQFFNNKVFLLYLLPVINIIIEYFWGEDKLSIEVLSTI
NLSSFFIGVTMVFIVILYGLNKYKFSEQAYFLKILMLTNFIAIIPFVGFYVLPTLVLGDYIFPSVFVAPFLLLIPFSLVY
QFMANKIYNIEFILGRLRYYGLLAIIPTVIVVCIVTFTQYQTGGYNTVRLAIYIYLVMLGVFYLKEMLDFRFRLKRFSEK
FNYQDSIFKFTQTIRTFTSLNQVLLELKQTILDVLTVSQAHVLGVKSDGTISLLEGDTEEYPWIPYEQEVTKVITDIGKI
VEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLEHVKKEGPNPAWLNKL
MFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLANFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQELRPQLLYD
LGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKAKEVLIMLVCIKEKVVLHYEDD
GIGVDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=470095 H2R00_RS19770 WP_182070142.1 3994072..3996384(+) (comP) [Bacillus haynesii strain P19]
TTGAAATCTTCATTAAAGTTTATTTCAATTTTGCTGGTTCTTTTAAGTTTTGTTTATAGTATTTACATTTGTTATCTCTG
TTTTAATAATGCATTTGAAGGCGCTAAATTAAAGTATAGTTCACATAATCAATTAGTTGTTATAGAAGTAGAAGAGCATT
CTCTTGCGGAATATGCCGGACTAAAAAAAGGTGATATTCTTCTCGAGATTGATGGTAAATCTATAACCAAAAAGAGGGAG
CCAGCAGAAGACATTCTTTCTTGGGCGTACTCAGTCACTGTAAAACGGGATGCCGAAGTGGTGGACATCAATACCAAGGA
GACATTTCTTGGATATGATATATTTTTTGTGTTTTTGATCCCTGTAACTTTTTATTTATTATGCCTATTTTGTATATTTT
TCATTTTAAATTCAAGTAGATCAAAAAAACTGTTTTCTTCAACTTTTTTATTGATTGCTTTTTTATTAAACGTTTCTATT
GCATATTTAAGTGCAGGTGGTGTATCCAGGGGTGATGTGTTTAGTAGATACGTAAATTTGCTGACATTTCTATCAGTACC
CGTGAGTTACTTACATTTTGTTTATCAGTATTTTAAAGAAAAAGGGAAACAATTTTTCAATAATAAAGTGTTTTTACTAT
ATCTCTTGCCGGTAATTAATATTATTATTGAATATTTTTGGGGCGAGGATAAACTATCAATTGAAGTTCTAAGCACCATA
AATTTGTCATCTTTTTTTATTGGTGTAACCATGGTTTTCATCGTTATATTATATGGATTAAATAAATATAAGTTTTCTGA
GCAGGCTTATTTTTTAAAGATATTGATGCTAACCAATTTTATAGCAATAATACCTTTTGTTGGTTTTTATGTTTTGCCAA
CTTTAGTTTTAGGTGATTACATATTTCCATCTGTCTTTGTTGCACCATTTCTTTTATTAATTCCATTTTCTCTAGTCTAT
CAATTTATGGCAAATAAAATATACAATATTGAGTTTATTCTGGGTAGATTAAGATATTATGGATTATTGGCGATTATACC
AACAGTTATAGTTGTATGTATAGTAACGTTTACACAGTACCAAACAGGCGGCTACAACACAGTCAGACTCGCAATTTATA
TTTATCTTGTTATGCTTGGTGTATTTTATTTAAAAGAAATGCTAGACTTCCGTTTTCGCCTAAAGCGTTTCTCAGAGAAG
TTTAACTATCAAGATAGTATTTTTAAGTTTACTCAAACGATCCGGACATTTACCTCTTTGAACCAAGTATTGTTAGAATT
GAAACAAACGATTCTGGATGTACTAACCGTCAGTCAAGCGCATGTTTTAGGAGTGAAAAGCGACGGAACAATATCTTTGC
TCGAGGGAGATACCGAAGAATATCCTTGGATTCCCTACGAACAAGAAGTAACTAAGGTCATCACTGACATCGGCAAAATC
GTCGAAGTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTCTGTTTGTCGGTTTT
AAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGTTTTATACGAGCGTTTCCCTGGAAAACG
TCTTGAAAATCGGCGAGCTGATGGAGCATCTGGAACATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTGAATAAATTG
ATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTAGCCCGCGATCTCCATGATTCTGTGCTGCAGGACATGATTTCCTT
GAAGCATCAAAGCGAGATGTTTTTGGCTAATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCCGGCAAAGGCTCATCA
ATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGCCAAGAGCTGAGACCGCAGCTGTTGTACGAT
CTCGGACTTGTCAAAGCCCTTTCGAAACTGGCGGCGCAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAATAC
GGAAAGGTTCTCAAAGGTGCTCGACTTGGACACGCAGTTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATGCGG
TTAAACACTCGAAAGCTAAAGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGATGAC
GGCATCGGGGTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGCATTCGCGAGCGCGTCCGCGC
GCTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCGCCATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(569-638)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(681-768)

PDZ domain (PDZ_6)

(47-77)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

52.168

100

0.531