Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   H2R00_RS19755 Genome accession   NZ_CP059494
Coordinates   3992672..3992812 (+) Length   46 a.a.
NCBI ID   WP_003184860.1    Uniprot ID   P69890
Organism   Bacillus haynesii strain P19     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3987672..3997812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2R00_RS19730 - 3987775..3988176 (+) 402 WP_182070136.1 YueI family protein -
  H2R00_RS19735 - 3988359..3988910 (+) 552 WP_182070137.1 cysteine hydrolase family protein -
  H2R00_RS19740 - 3988988..3990397 (+) 1410 WP_244958341.1 nicotinate phosphoribosyltransferase -
  H2R00_RS19745 - 3990577..3991797 (+) 1221 WP_182070139.1 HDOD domain-containing protein -
  H2R00_RS19750 - 3991839..3992186 (-) 348 WP_244958258.1 hypothetical protein -
  H2R00_RS19755 degQ 3992672..3992812 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  H2R00_RS19760 - 3993002..3993883 (+) 882 WP_182070141.1 polyprenyl synthetase family protein -
  H2R00_RS19765 comX 3993887..3994060 (+) 174 WP_176276343.1 competence pheromone ComX -
  H2R00_RS19770 comP 3994072..3996384 (+) 2313 WP_182070142.1 ATP-binding protein Regulator
  H2R00_RS19775 comA 3996471..3997109 (+) 639 WP_003184849.1 response regulator transcription factor Regulator
  H2R00_RS19780 - 3997126..3997515 (+) 390 WP_154999191.1 hotdog fold thioesterase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5747.56 Da        Isoelectric Point: 8.4596

>NTDB_id=470094 H2R00_RS19755 WP_003184860.1 3992672..3992812(+) (degQ) [Bacillus haynesii strain P19]
MEKQQIEELKQLLWRLENEIRETKDSLRKINKSIDQYDKYTYLKTS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=470094 H2R00_RS19755 WP_003184860.1 3992672..3992812(+) (degQ) [Bacillus haynesii strain P19]
GTGGAAAAGCAACAAATTGAAGAATTAAAACAACTGCTTTGGCGGCTAGAGAATGAAATCAGAGAAACAAAGGACTCCTT
GCGCAAGATTAACAAAAGCATTGATCAATACGATAAGTACACATATCTAAAAACCTCGTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P69890

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

71.429

91.304

0.652