Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H1D55_RS08795 Genome accession   NZ_CP059474
Coordinates   1906116..1906499 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain M175-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1901116..1911499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1D55_RS08780 - 1903008..1905086 (-) 2079 WP_000505931.1 methyl-accepting chemotaxis protein -
  H1D55_RS08785 - 1905133..1905669 (-) 537 WP_000729758.1 chemotaxis protein CheW -
  H1D55_RS08790 - 1905730..1906092 (-) 363 WP_000101096.1 response regulator -
  H1D55_RS08795 pilG 1906116..1906499 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  H1D55_RS08800 - 1906782..1907420 (+) 639 WP_002027721.1 hypothetical protein -
  H1D55_RS08805 - 1907480..1908598 (+) 1119 WP_042051249.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=469915 H1D55_RS08795 WP_000389061.1 1906116..1906499(-) (pilG) [Acinetobacter baumannii strain M175-3]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=469915 H1D55_RS08795 WP_000389061.1 1906116..1906499(-) (pilG) [Acinetobacter baumannii strain M175-3]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATACGCCGTACCGCAGAAACTCTATT
GCAACGCGAAGGTTGCGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37