Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   H1R75_RS07435 Genome accession   NZ_CP059471
Coordinates   1470557..1471561 (-) Length   334 a.a.
NCBI ID   WP_021142864.1    Uniprot ID   -
Organism   Streptococcus equinus strain MDC1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1465557..1476561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1R75_RS07420 (H1R75_07420) thrS 1465844..1467790 (-) 1947 WP_024343725.1 threonine--tRNA ligase -
  H1R75_RS07425 (H1R75_07425) - 1468141..1469475 (-) 1335 WP_033153123.1 glycosyltransferase family 4 protein -
  H1R75_RS07430 (H1R75_07430) - 1469477..1470475 (-) 999 WP_021142863.1 glycosyltransferase family 4 protein -
  H1R75_RS07435 (H1R75_07435) ccpA 1470557..1471561 (-) 1005 WP_021142864.1 catabolite control protein A Regulator
  H1R75_RS07440 (H1R75_07440) - 1471902..1472987 (+) 1086 WP_182001288.1 M24 family metallopeptidase -
  H1R75_RS07445 (H1R75_07445) - 1473022..1473348 (-) 327 WP_004232841.1 DMT family transporter -
  H1R75_RS07450 (H1R75_07450) - 1473476..1473970 (+) 495 WP_021142868.1 NAD(+) diphosphatase -
  H1R75_RS07455 (H1R75_07455) - 1473987..1474877 (-) 891 WP_182001289.1 LysR family transcriptional regulator -
  H1R75_RS07460 (H1R75_07460) - 1475054..1475782 (+) 729 WP_027968479.1 DUF554 domain-containing protein -
  H1R75_RS07465 (H1R75_07465) - 1475919..1476353 (+) 435 WP_182001290.1 MarR family winged helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 36727.77 Da        Isoelectric Point: 5.3038

>NTDB_id=469844 H1R75_RS07435 WP_021142864.1 1470557..1471561(-) (ccpA) [Streptococcus equinus strain MDC1]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILARGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADVVDILAKNNKDIAFVSGPLIDEINGKVRLAGYKEGLEKNNLSFKEGLVFEANYNYKDGYELAQRVMNSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
ILNHGLKLRGTSRQ

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=469844 H1R75_RS07435 WP_021142864.1 1470557..1471561(-) (ccpA) [Streptococcus equinus strain MDC1]
ATGAACACTGATGATACGATTACAATTTATGACGTTGCACGTGAAGCTGGCGTCTCAATGGCAACAGTCAGTCGTGTTGT
AAATGGTAATAAAAACGTAAAGGAAAACACTCGTAAAAAAGTCCTTGAAGTTATTGACCGTTTAGACTATCGTCCAAATG
CAGTTGCTCGTGGTTTGGCAAGTAAGAAAACGACAACTGTTGGTGTTGTTATTCCAAATATCGCTAATAGCTATTTCTCA
ATTTTAGCGAGAGGGATTGATGACATTGCTGCTATGTACAAATACAATATCGTTCTTGCGTCAAGTGATGAAGATGACGA
TAAAGAAGTTAATGTCGTAAACACTTTGTTTGCTAAACAAGTAGATGGTATTATCTTCATGGGTCACCATTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTTGTTCTAGCAGGGACAGTTGATTTAGAACATCAACTTCCAAGT
GTTAATATTGATTACAAAGCTGCTGTAGCAGATGTTGTTGATATTTTAGCTAAAAACAATAAAGATATTGCCTTTGTTTC
AGGACCACTTATTGACGAAATCAATGGTAAAGTTCGTCTTGCTGGTTACAAAGAAGGACTTGAAAAGAACAATCTTTCAT
TCAAAGAAGGACTTGTATTTGAAGCAAACTATAACTACAAAGATGGTTATGAGCTTGCTCAACGTGTGATGAACTCAGGT
GCAACAGCTGCTTATGTAGCTGAAGATGAATTAGCTGCGGGTCTTTTGAACGGCTTGTTTGCTGCAGGTAAAAAAGTTCC
TGAAGACTTTGAAATCATTACAAGTAATGACTCACCAATTACTTCATACACACGTCCAAACCTCAGCTCAATCAGTCAAC
CAGTTTATGACCTTGGAGCTGTCAGCATGCGTATGTTGACTAAAATCATGAACAAAGAAGAACTTGAAGAAAAAGAAATC
ATTCTTAATCATGGTCTTAAATTACGTGGTACATCACGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.042

100

0.79

  ccpA Streptococcus pneumoniae D39

76.347

100

0.763

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.495

99.102

0.56