Detailed information NTG0046935

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPGAM_RS01800
• Genome accession: NC_017371
• Coordinates: 362253..363053 (+)
• Length: 266 a.a.
• NCBI ID: WP_000835211.1
• Uniprot ID: -
• Organism: Helicobacter pylori Gambia94/24
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 357253..368053

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPGAM_RS01765 (HPGAM_01820)	pseH	357752..358294 (+)	543	WP_000742704.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPGAM_RS01770 (HPGAM_01825)	-	358227..359165 (-)	939	WP_000833878.1	tetraacyldisaccharide 4'-kinase	-
HPGAM_RS01775 (HPGAM_01830)	-	359162..359944 (-)	783	WP_001168269.1	NAD+ synthase	-
HPGAM_RS01785 (HPGAM_01835)	ilvC	360193..361185 (+)	993	WP_001207732.1	ketol-acid reductoisomerase	-
HPGAM_RS01790 (HPGAM_01840)	minD	361210..362016 (+)	807	WP_001019057.1	septum site-determining protein MinD	-
HPGAM_RS01795 (HPGAM_01845)	minE	362013..362246 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
HPGAM_RS01800 (HPGAM_01850)	dprA	362253..363053 (+)	801	WP_000835211.1	DNA-processing protein DprA	Machinery gene
HPGAM_RS01805 (HPGAM_01855)	dprB	363050..363454 (+)	405	WP_000599257.1	Holliday junction resolvase RuvX	Machinery gene
HPGAM_RS01810 (HPGAM_01860)	-	363731..364306 (+)	576	WP_000168228.1	tetratricopeptide repeat protein	-
HPGAM_RS01815 (HPGAM_01865)	-	364493..364831 (+)	339	WP_000699898.1	hypothetical protein	-
HPGAM_RS01820 (HPGAM_01870)	-	364815..365375 (+)	561	WP_001035877.1	hypothetical protein	-
HPGAM_RS01825 (HPGAM_01875)	-	365546..366427 (-)	882	WP_001117154.1	RluA family pseudouridine synthase	-
HPGAM_RS01830 (HPGAM_01880)	recJ	366427..367977 (-)	1551	WP_000810772.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29747.72 Da
• Isoelectric Point: 8.9028

>NTDB_id=46935 HPGAM_RS01800 WP_000835211.1 362253..363053(+) (dprA) [Helicobacter pylori Gambia94/24]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLDVPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQKGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLGKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRVNHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=46935 HPGAM_RS01800 WP_000835211.1 362253..363053(+) (dprA) [Helicobacter pylori Gambia94/24]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTGGACGTGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATTTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAAGGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTATTTGTTTTACCCCAACGCTTGAACGAGAGCGACGG
CACTAATGAGCTTTTAGGAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTGAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCGAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAACTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCGTCAATCACATTGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.611	81.203	0.395