Detailed information
Bioinformatically predicted
Overview
| Name | crp | Type | Regulator |
| Locus tag | H0S62_RS12910 | Genome accession | NZ_CP059386 |
| Coordinates | 2601760..2602467 (-) | Length | 235 a.a. |
| NCBI ID | WP_000203217.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 36-1512 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2574587..2623012 | 2601760..2602467 | within | 0 |
Gene organization within MGE regions
Location: 2574587..2623012
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0S62_RS12775 (H0S62_12775) | - | 2574587..2575009 (-) | 423 | WP_002001056.1 | Lrp/AsnC family transcriptional regulator | - |
| H0S62_RS12780 (H0S62_12780) | - | 2575145..2576380 (+) | 1236 | WP_017725625.1 | aspartate aminotransferase family protein | - |
| H0S62_RS12785 (H0S62_12785) | - | 2576377..2576766 (+) | 390 | Protein_2467 | arginine N-succinyltransferase | - |
| H0S62_RS12790 (H0S62_12790) | - | 2576821..2577753 (+) | 933 | WP_001043692.1 | IS5-like element ISAba13 family transposase | - |
| H0S62_RS12795 (H0S62_12795) | - | 2577791..2578720 (+) | 930 | WP_002059758.1 | metal-dependent hydrolase | - |
| H0S62_RS12800 (H0S62_12800) | - | 2578786..2579616 (+) | 831 | WP_000599996.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| H0S62_RS12805 (H0S62_12805) | - | 2579640..2581007 (+) | 1368 | Protein_2471 | flavin-containing monooxygenase | - |
| H0S62_RS12815 (H0S62_12815) | - | 2582314..2582502 (+) | 189 | Protein_2473 | cyclohexanone monooxygenase | - |
| H0S62_RS12820 (H0S62_12820) | - | 2582871..2583098 (+) | 228 | WP_017725718.1 | hypothetical protein | - |
| H0S62_RS12825 (H0S62_12825) | - | 2583422..2584741 (+) | 1320 | WP_000729980.1 | NCS2 family permease | - |
| H0S62_RS12830 (H0S62_12830) | - | 2584853..2585851 (+) | 999 | WP_071225455.1 | adenosine deaminase | - |
| H0S62_RS12835 (H0S62_12835) | - | 2585902..2586863 (-) | 962 | Protein_2477 | IS3-like element ISAba45 family transposase | - |
| H0S62_RS12845 (H0S62_12845) | - | 2588173..2588592 (-) | 420 | Protein_2479 | transposase | - |
| H0S62_RS12850 (H0S62_12850) | - | 2588675..2589232 (-) | 558 | WP_002059726.1 | cytochrome b | - |
| H0S62_RS12855 (H0S62_12855) | - | 2589474..2589851 (+) | 378 | WP_005129108.1 | hypothetical protein | - |
| H0S62_RS12860 (H0S62_12860) | rnhB | 2589917..2590483 (+) | 567 | WP_000495834.1 | ribonuclease HII | - |
| H0S62_RS12865 (H0S62_12865) | csrA | 2590553..2590807 (-) | 255 | WP_000906487.1 | carbon storage regulator CsrA | - |
| H0S62_RS12870 (H0S62_12870) | - | 2591054..2592334 (-) | 1281 | WP_001185176.1 | aspartate kinase | - |
| H0S62_RS12875 (H0S62_12875) | alaS | 2592400..2595036 (-) | 2637 | WP_000199457.1 | alanine--tRNA ligase | - |
| H0S62_RS12880 (H0S62_12880) | gap | 2595306..2596331 (+) | 1026 | WP_001188823.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| H0S62_RS12885 (H0S62_12885) | - | 2596607..2597773 (+) | 1167 | WP_000155680.1 | ATP phosphoribosyltransferase regulatory subunit | - |
| H0S62_RS12890 (H0S62_12890) | - | 2597838..2599157 (+) | 1320 | WP_000517792.1 | adenylosuccinate synthase | - |
| H0S62_RS12895 (H0S62_12895) | - | 2599279..2599596 (+) | 318 | WP_000776215.1 | hypothetical protein | - |
| H0S62_RS12900 (H0S62_12900) | - | 2599713..2600492 (+) | 780 | WP_001034598.1 | M48 family metallopeptidase | - |
| H0S62_RS12905 (H0S62_12905) | - | 2600550..2601599 (-) | 1050 | WP_002059731.1 | NADP(H)-dependent aldo-keto reductase | - |
| H0S62_RS12910 (H0S62_12910) | crp | 2601760..2602467 (-) | 708 | WP_000203217.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| H0S62_RS19690 | - | 2602708..2602827 (+) | 120 | Protein_2493 | hypothetical protein | - |
| H0S62_RS12915 (H0S62_12915) | - | 2602906..2603328 (+) | 423 | WP_001195082.1 | OsmC family protein | - |
| H0S62_RS12920 (H0S62_12920) | - | 2603423..2603848 (+) | 426 | WP_002059735.1 | GNAT family N-acetyltransferase | - |
| H0S62_RS12925 (H0S62_12925) | - | 2603845..2604651 (-) | 807 | WP_001237336.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| H0S62_RS12930 (H0S62_12930) | clpB | 2604952..2607531 (+) | 2580 | WP_001210050.1 | ATP-dependent chaperone ClpB | - |
| H0S62_RS12935 (H0S62_12935) | - | 2607589..2608077 (-) | 489 | WP_000941316.1 | CinA family protein | - |
| H0S62_RS12940 (H0S62_12940) | - | 2608346..2608762 (+) | 417 | WP_032023126.1 | hypothetical protein | - |
| H0S62_RS12945 (H0S62_12945) | rlmKL | 2608788..2610992 (-) | 2205 | WP_017725572.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| H0S62_RS12950 (H0S62_12950) | - | 2611232..2611576 (+) | 345 | WP_000655897.1 | hypothetical protein | - |
| H0S62_RS12955 (H0S62_12955) | - | 2611700..2612716 (+) | 1017 | WP_002059721.1 | aspartate carbamoyltransferase catalytic subunit | - |
| H0S62_RS12960 (H0S62_12960) | - | 2612729..2613964 (+) | 1236 | WP_002059737.1 | dihydroorotase | - |
| H0S62_RS12965 (H0S62_12965) | - | 2614178..2615593 (+) | 1416 | WP_000026486.1 | OmpA family protein | - |
| H0S62_RS12970 (H0S62_12970) | - | 2615680..2616459 (+) | 780 | WP_002059729.1 | Rossmann-like and DUF2520 domain-containing protein | - |
| H0S62_RS12975 (H0S62_12975) | - | 2616470..2617096 (-) | 627 | WP_000912925.1 | glutathione S-transferase family protein | - |
| H0S62_RS12980 (H0S62_12980) | - | 2617312..2617926 (+) | 615 | WP_017725571.1 | hypothetical protein | - |
| H0S62_RS12985 (H0S62_12985) | - | 2617894..2618826 (-) | 933 | WP_001043692.1 | IS5-like element ISAba13 family transposase | - |
| H0S62_RS12995 (H0S62_12995) | - | 2620195..2621985 (+) | 1791 | Protein_2510 | putative Ig domain-containing protein | - |
| H0S62_RS13000 (H0S62_13000) | - | 2622080..2623012 (+) | 933 | WP_001040037.1 | IS5-like element ISAha2 family transposase | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 26567.18 Da Isoelectric Point: 4.6625
>NTDB_id=469267 H0S62_RS12910 WP_000203217.1 2601760..2602467(-) (crp) [Acinetobacter baumannii strain 36-1512]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDTSLEETPVTDEDYDDEE
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDTSLEETPVTDEDYDDEE
Nucleotide
Download Length: 708 bp
>NTDB_id=469267 H0S62_RS12910 WP_000203217.1 2601760..2602467(-) (crp) [Acinetobacter baumannii strain 36-1512]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGACGATGAACGTGAAATTGTTGTGGCATATTTGAATCCTGGTGACTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCTGAAGTTCGTACCCGTGATGTCTGTGAAATTGCGGA
AATTTCATATGACAACTTCCACGAACTGAGCAAACAGTATCCAGATCTCAGCTATGCCGTTTTCGCGCAACTCGTTCGTC
GTTTAAAAAATACAACTCGTAAAATGACCGATCTTGCATTTATTGATGTGTCAGGTCGTATTGCGCGTTGCTTAATCGAC
CTATCTTCACAACCAGAAGCAATGATCTTGCCGAATGGCCGTCAAATTCGTATTACTCGACAAGAGATTGGACGCATTGT
CGGGTGTTCACGAGAAATGGTTGGCCGTGTATTAAAGACCTTAGAAGATCAAGGTATGATTCAAACTGACGGTAAAGCTA
TTCTAATTTTTGATACTTCATTAGAAGAAACCCCAGTCACTGACGAAGACTATGATGACGAAGAATAA
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGACGATGAACGTGAAATTGTTGTGGCATATTTGAATCCTGGTGACTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCTGAAGTTCGTACCCGTGATGTCTGTGAAATTGCGGA
AATTTCATATGACAACTTCCACGAACTGAGCAAACAGTATCCAGATCTCAGCTATGCCGTTTTCGCGCAACTCGTTCGTC
GTTTAAAAAATACAACTCGTAAAATGACCGATCTTGCATTTATTGATGTGTCAGGTCGTATTGCGCGTTGCTTAATCGAC
CTATCTTCACAACCAGAAGCAATGATCTTGCCGAATGGCCGTCAAATTCGTATTACTCGACAAGAGATTGGACGCATTGT
CGGGTGTTCACGAGAAATGGTTGGCCGTGTATTAAAGACCTTAGAAGATCAAGGTATGATTCAAACTGACGGTAAAGCTA
TTCTAATTTTTGATACTTCATTAGAAGAAACCCCAGTCACTGACGAAGACTATGATGACGAAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| crp | Acinetobacter baumannii D1279779 |
99.574 |
100 |
0.996 |
| crp | Vibrio cholerae strain A1552 |
47.343 |
88.085 |
0.417 |
| crp | Haemophilus influenzae Rd KW20 |
48.705 |
82.128 |
0.4 |