Detailed information NTG0046912

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPF16_RS01755
• Genome accession: NC_017368
• Coordinates: 344546..345346 (+)
• Length: 266 a.a.
• NCBI ID: WP_000841128.1
• Uniprot ID: -
• Organism: Helicobacter pylori F16
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 339546..350346

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPF16_RS01720 (HPF16_0335)	pseH	340041..340583 (+)	543	WP_000742587.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPF16_RS01725 (HPF16_0336)	-	340516..341454 (-)	939	WP_000833900.1	tetraacyldisaccharide 4'-kinase	-
HPF16_RS01730 (HPF16_0337)	-	341451..342233 (-)	783	WP_001168259.1	NAD+ synthase	-
HPF16_RS01740 (HPF16_0338)	ilvC	342482..343474 (+)	993	WP_001207563.1	ketol-acid reductoisomerase	-
HPF16_RS01745 (HPF16_0339)	minD	343498..344304 (+)	807	WP_001019102.1	septum site-determining protein MinD	-
HPF16_RS01750 (HPF16_0340)	minE	344301..344534 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HPF16_RS01755 (HPF16_0341)	dprA	344546..345346 (+)	801	WP_000841128.1	DNA-processing protein DprA	Machinery gene
HPF16_RS01760 (HPF16_0342)	dprB	345343..345747 (+)	405	WP_000599228.1	Holliday junction resolvase RuvX	Machinery gene
HPF16_RS01765 (HPF16_0343)	-	345880..346350 (+)	471	WP_041200704.1	tetratricopeptide repeat protein	-
HPF16_RS01770 (HPF16_0344)	-	346538..346876 (+)	339	WP_000699916.1	hypothetical protein	-
HPF16_RS01775 (HPF16_0345)	-	346860..347420 (+)	561	WP_001034310.1	hypothetical protein	-
HPF16_RS08385 (HPF16_0346)	-	347431..347613 (+)	183	WP_014535756.1	lysozyme	-
HPF16_RS08390	-	347706..347864 (+)	159	WP_231844776.1	lysozyme	-
HPF16_RS01785 (HPF16_0347)	-	347930..348091 (+)	162	WP_180424435.1	lysozyme	-
HPF16_RS01790	-	348419..348805 (+)	387	Protein_340	DUF1294 domain-containing protein	-
HPF16_RS01795 (HPF16_0348)	-	348805..349590 (+)	786	WP_000119825.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29804.75 Da
• Isoelectric Point: 8.5799

>NTDB_id=46912 HPF16_RS01755 WP_000841128.1 344546..345346(+) (dprA) [Helicobacter pylori F16]
MKSNFQYSTLENIPKAFDILKDPPKKLYCAGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIVQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=46912 HPF16_RS01755 WP_000841128.1 344546..345346(+) (dprA) [Helicobacter pylori F16]
ATGAAAAGTAACTTCCAATACAGCACGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGCGGGCGATATAAAGCTTTTAGATGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCAGTTATTGTGAGTGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGTGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414