Detailed information NTG0046893

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPF57_RS01930
• Genome accession: NC_017367
• Coordinates: 392464..393264 (+)
• Length: 266 a.a.
• NCBI ID: WP_000841139.1
• Uniprot ID: -
• Organism: Helicobacter pylori F57
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 387464..398264

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPF57_RS01895 (HPF57_0380)	pseH	387965..388507 (+)	543	WP_000742738.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPF57_RS01900 (HPF57_0381)	-	388440..389378 (-)	939	WP_000833916.1	tetraacyldisaccharide 4'-kinase	-
HPF57_RS01905 (HPF57_0382)	-	389375..390157 (-)	783	WP_001168201.1	NAD+ synthase	-
HPF57_RS01915 (HPF57_0383)	ilvC	390405..391397 (+)	993	WP_001207819.1	ketol-acid reductoisomerase	-
HPF57_RS01920 (HPF57_0384)	minD	391416..392222 (+)	807	WP_001029118.1	septum site-determining protein MinD	-
HPF57_RS01925 (HPF57_0385)	minE	392219..392452 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HPF57_RS01930 (HPF57_0386)	dprA	392464..393264 (+)	801	WP_000841139.1	DNA-processing protein DprA	Machinery gene
HPF57_RS01935 (HPF57_0387)	dprB	393261..393665 (+)	405	WP_000599232.1	Holliday junction resolvase RuvX	Machinery gene
HPF57_RS01940 (HPF57_0388)	-	393798..394421 (+)	624	WP_000840161.1	tetratricopeptide repeat protein	-
HPF57_RS01945 (HPF57_0389)	-	394552..394890 (+)	339	WP_000699911.1	hypothetical protein	-
HPF57_RS01950 (HPF57_0390)	-	394874..395440 (+)	567	WP_000037136.1	hypothetical protein	-
HPF57_RS01955 (HPF57_0391)	-	395452..395790 (+)	339	WP_014535561.1	glycoside hydrolase family protein	-
HPF57_RS08460 (HPF57_0392)	-	395973..396134 (+)	162	WP_232500959.1	lysozyme	-
HPF57_RS01965 (HPF57_0393)	-	396459..396845 (+)	387	WP_000397548.1	DUF1294 domain-containing protein	-
HPF57_RS01970 (HPF57_0395)	-	396845..397630 (+)	786	Protein_383	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29834.77 Da
• Isoelectric Point: 8.2306

>NTDB_id=46893 HPF57_RS01930 WP_000841139.1 392464..393264(+) (dprA) [Helicobacter pylori F57]
MKSNFQYSVLENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNDAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=46893 HPF57_RS01930 WP_000841139.1 392464..393264(+) (dprA) [Helicobacter pylori F57]
ATGAAAAGCAACTTCCAATACAGCGTGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGACGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATCTTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414