Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   HZT45_RS14530 Genome accession   NZ_CP059318
Coordinates   2998612..2999496 (-) Length   294 a.a.
NCBI ID   WP_032865221.1    Uniprot ID   -
Organism   Bacillus velezensis strain BIOMA BV10     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2993612..3004496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZT45_RS14495 (HZT45_14495) - 2993819..2994295 (+) 477 WP_052827786.1 Na+/H+ antiporter subunit E -
  HZT45_RS14500 (HZT45_14500) - 2994295..2994579 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  HZT45_RS14505 (HZT45_14505) mnhG 2994563..2994937 (+) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  HZT45_RS14510 (HZT45_14510) - 2994977..2995360 (-) 384 WP_012118312.1 hotdog fold thioesterase -
  HZT45_RS14515 (HZT45_14515) comA 2995382..2996026 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  HZT45_RS14520 (HZT45_14520) comP 2996107..2998416 (-) 2310 WP_020954299.1 histidine kinase Regulator
  HZT45_RS14525 (HZT45_14525) - 2998436..2998612 (-) 177 WP_007408675.1 competence pheromone ComX -
  HZT45_RS14530 (HZT45_14530) comQ 2998612..2999496 (-) 885 WP_032865221.1 class 1 isoprenoid biosynthesis enzyme Regulator
  HZT45_RS14535 (HZT45_14535) degQ 2999681..2999821 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  HZT45_RS14540 (HZT45_14540) - 3000286..3000627 (+) 342 WP_012118316.1 hypothetical protein -
  HZT45_RS14545 (HZT45_14545) - 3000634..3001857 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  HZT45_RS14550 (HZT45_14550) - 3001987..3003453 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  HZT45_RS14555 (HZT45_14555) - 3003471..3004022 (-) 552 WP_003152033.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 294 a.a.        Molecular weight: 33789.75 Da        Isoelectric Point: 6.1701

>NTDB_id=468546 HZT45_RS14530 WP_032865221.1 2998612..2999496(-) (comQ) [Bacillus velezensis strain BIOMA BV10]
MKSIIEQNIFNQHLLQLLLGFVESRKYLTFAESALLHYEVFGGRDFKTAEKLAAGIEILTLSADIIDDLEDEDNKQALWM
KIDRSEALSAAFSLYTAGLQGINSINMNPFILSYILKYTQDAMQGQHDDIINKPEKEDESLEVIRLKCGSLFALSNVAGT
MLATGKYNETVETYSYYKGMFEQIYSDYLALFSSKRSDILKDKHTLINLYLKRLFNEPSEKLVRMFSHRETHLKFISDKN
NFIQTLTDAGVTQYVSVLHQLYKQKCENAIEKLNLETSKIDKLKKYVVNRGIEV

Nucleotide


Download         Length: 885 bp        

>NTDB_id=468546 HZT45_RS14530 WP_032865221.1 2998612..2999496(-) (comQ) [Bacillus velezensis strain BIOMA BV10]
ATGAAGAGTATAATAGAGCAAAACATATTCAATCAACATTTACTACAGCTTCTTCTTGGGTTTGTTGAATCCAGAAAATA
TTTAACCTTTGCTGAATCTGCTTTATTGCATTATGAAGTTTTTGGCGGAAGGGATTTTAAGACTGCTGAGAAACTTGCGG
CGGGAATTGAAATTCTTACGCTTTCCGCCGATATTATTGATGATCTTGAAGATGAAGATAACAAACAAGCTCTTTGGATG
AAGATAGACCGTTCAGAAGCTTTAAGCGCAGCTTTTTCATTATACACAGCAGGGCTGCAGGGGATTAATTCAATTAACAT
GAATCCTTTTATTCTTTCTTACATACTGAAATATACACAAGACGCTATGCAAGGACAACACGATGATATAATCAATAAGC
CAGAGAAAGAAGATGAAAGTTTAGAGGTCATTAGATTAAAATGCGGGAGTCTATTCGCTCTATCCAATGTGGCAGGTACT
ATGTTAGCAACTGGAAAGTATAATGAAACTGTTGAAACGTATTCCTATTACAAAGGAATGTTTGAACAGATATATAGTGA
TTATCTGGCTCTTTTCAGCTCTAAACGCAGTGATATTTTAAAAGATAAACACACGTTAATCAACTTGTACCTTAAGAGGC
TGTTTAACGAGCCTTCTGAAAAATTGGTTCGTATGTTTTCTCATAGAGAAACACACCTTAAGTTTATATCTGATAAAAAC
AATTTTATTCAGACATTAACTGATGCAGGTGTTACTCAGTATGTTTCAGTTTTACACCAATTGTATAAGCAAAAATGTGA
AAATGCTATAGAGAAACTAAATCTTGAAACCAGTAAAATAGATAAATTGAAAAAATATGTAGTTAATAGGGGGATTGAAG
TATAA

Domains


Predicted by InterproScan.

(35-229)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

62.456

96.939

0.605