Detailed information NTG0046853

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPF30_RS04995
• Genome accession: NC_017365
• Coordinates: 1034512..1035312 (-)
• Length: 266 a.a.
• NCBI ID: WP_000840080.1
• Uniprot ID: -
• Organism: Helicobacter pylori F30
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1029512..1040312

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPF30_RS04950 (HPF30_0953)	-	1030250..1031035 (-)	786	WP_000119833.1	hypothetical protein	-
HPF30_RS04955 (HPF30_0954)	-	1031035..1031421 (-)	387	WP_000397433.1	DUF1294 domain-containing protein	-
HPF30_RS08455 (HPF30_0955)	-	1031568..1031699 (-)	132	WP_269446447.1	hypothetical protein	-
HPF30_RS07920 (HPF30_0956)	-	1031847..1032431 (-)	585	WP_014535223.1	glycoside hydrolase family protein	-
HPF30_RS04970 (HPF30_0957)	-	1032442..1033002 (-)	561	WP_000038871.1	hypothetical protein	-
HPF30_RS04975 (HPF30_0958)	-	1032986..1033324 (-)	339	WP_000699913.1	hypothetical protein	-
HPF30_RS08520 (HPF30_0959)	-	1033512..1033772 (-)	261	WP_014535224.1	tetratricopeptide repeat protein	-
HPF30_RS08530 (HPF30_0960)	-	1033820..1034053 (-)	234	WP_014535225.1	tetratricopeptide repeat protein	-
HPF30_RS04990 (HPF30_0961)	dprB	1034111..1034515 (-)	405	WP_000599207.1	Holliday junction resolvase RuvX	Machinery gene
HPF30_RS04995 (HPF30_0962)	dprA	1034512..1035312 (-)	801	WP_000840080.1	DNA-processing protein DprA	Machinery gene
HPF30_RS05000 (HPF30_0963)	minE	1035324..1035557 (-)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HPF30_RS05005 (HPF30_0964)	minD	1035554..1036360 (-)	807	WP_001019100.1	septum site-determining protein MinD	-
HPF30_RS05010 (HPF30_0965)	ilvC	1036384..1037376 (-)	993	WP_014535226.1	ketol-acid reductoisomerase	-
HPF30_RS05020 (HPF30_0966)	-	1037625..1038407 (+)	783	WP_001168229.1	NAD+ synthase	-
HPF30_RS05025 (HPF30_0967)	-	1038404..1039342 (+)	939	WP_000833949.1	tetraacyldisaccharide 4'-kinase	-
HPF30_RS05030 (HPF30_0968)	pseH	1039275..1039817 (-)	543	WP_000742660.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29761.68 Da
• Isoelectric Point: 8.8810

>NTDB_id=46853 HPF30_RS04995 WP_000840080.1 1034512..1035312(-) (dprA) [Helicobacter pylori F30]
MKSNFQYSALENIPKAFDILKDPPKKLYCAGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEKKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=46853 HPF30_RS04995 WP_000840080.1 1034512..1035312(-) (dprA) [Helicobacter pylori F30]
ATGAAAAGCAACTTTCAATACAGCGCACTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGCGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCTAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTAATCTATCCCACAAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATTGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTACCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAAAGAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414