Detailed information NTG0046831

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPLT_RS01675
• Genome accession: NC_017362
• Coordinates: 335762..336562 (+)
• Length: 266 a.a.
• NCBI ID: WP_000835225.1
• Uniprot ID: -
• Organism: Helicobacter pylori Lithuania75
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 330762..341562

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPLT_RS01640 (HPLT_01680)	pseH	331262..331804 (+)	543	WP_000742690.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPLT_RS01645 (HPLT_01685)	-	331737..332675 (-)	939	WP_000833919.1	tetraacyldisaccharide 4'-kinase	-
HPLT_RS01650 (HPLT_01690)	-	332672..333454 (-)	783	WP_001168234.1	NAD+ synthase	-
HPLT_RS01660 (HPLT_01695)	ilvC	333703..334695 (+)	993	WP_001207729.1	ketol-acid reductoisomerase	-
HPLT_RS01665 (HPLT_01700)	minD	334719..335525 (+)	807	WP_001019029.1	septum site-determining protein MinD	-
HPLT_RS01670 (HPLT_01705)	minE	335522..335755 (+)	234	WP_000051430.1	cell division topological specificity factor MinE	-
HPLT_RS01675 (HPLT_01710)	dprA	335762..336562 (+)	801	WP_000835225.1	DNA-processing protein DprA	Machinery gene
HPLT_RS01680 (HPLT_01715)	dprB	336559..336963 (+)	405	WP_000599192.1	Holliday junction resolvase RuvX	Machinery gene
HPLT_RS01685 (HPLT_01720)	-	337092..337643 (+)	552	WP_014534946.1	tetratricopeptide repeat protein	-
HPLT_RS01690 (HPLT_01725)	-	337759..338097 (+)	339	WP_000699896.1	hypothetical protein	-
HPLT_RS01695 (HPLT_01730)	-	338081..338647 (+)	567	WP_000038883.1	hypothetical protein	-
HPLT_RS01700 (HPLT_01735)	-	338698..339069 (+)	372	WP_228840909.1	glycoside hydrolase family protein	-
HPLT_RS01705 (HPLT_01740)	-	339066..339329 (+)	264	WP_014534947.1	hypothetical protein	-
HPLT_RS01715 (HPLT_01750)	-	339631..340014 (+)	384	WP_000393581.1	DUF1294 domain-containing protein	-
HPLT_RS01720 (HPLT_01755)	-	340014..340799 (+)	786	WP_000488070.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29760.71 Da
• Isoelectric Point: 8.5799

>NTDB_id=46831 HPLT_RS01675 WP_000835225.1 335762..336562(+) (dprA) [Helicobacter pylori Lithuania75]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGILNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINNIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=46831 HPLT_RS01675 WP_000835225.1 335762..336562(+) (dprA) [Helicobacter pylori Lithuania75]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACAAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTTTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGTCTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGTGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTACCCCAGCGCTTAAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTGAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGTATCAATAATATTGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414