Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | HPLT_RS01680 | Genome accession | NC_017362 |
| Coordinates | 336559..336963 (+) | Length | 134 a.a. |
| NCBI ID | WP_000599192.1 | Uniprot ID | - |
| Organism | Helicobacter pylori Lithuania75 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 331559..341963
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPLT_RS01645 (HPLT_01685) | - | 331737..332675 (-) | 939 | WP_000833919.1 | tetraacyldisaccharide 4'-kinase | - |
| HPLT_RS01650 (HPLT_01690) | - | 332672..333454 (-) | 783 | WP_001168234.1 | NAD+ synthase | - |
| HPLT_RS01660 (HPLT_01695) | ilvC | 333703..334695 (+) | 993 | WP_001207729.1 | ketol-acid reductoisomerase | - |
| HPLT_RS01665 (HPLT_01700) | minD | 334719..335525 (+) | 807 | WP_001019029.1 | septum site-determining protein MinD | - |
| HPLT_RS01670 (HPLT_01705) | minE | 335522..335755 (+) | 234 | WP_000051430.1 | cell division topological specificity factor MinE | - |
| HPLT_RS01675 (HPLT_01710) | dprA | 335762..336562 (+) | 801 | WP_000835225.1 | DNA-processing protein DprA | Machinery gene |
| HPLT_RS01680 (HPLT_01715) | dprB | 336559..336963 (+) | 405 | WP_000599192.1 | Holliday junction resolvase RuvX | Machinery gene |
| HPLT_RS01685 (HPLT_01720) | - | 337092..337643 (+) | 552 | WP_014534946.1 | tetratricopeptide repeat protein | - |
| HPLT_RS01690 (HPLT_01725) | - | 337759..338097 (+) | 339 | WP_000699896.1 | hypothetical protein | - |
| HPLT_RS01695 (HPLT_01730) | - | 338081..338647 (+) | 567 | WP_000038883.1 | hypothetical protein | - |
| HPLT_RS01700 (HPLT_01735) | - | 338698..339069 (+) | 372 | WP_228840909.1 | glycoside hydrolase family protein | - |
| HPLT_RS01705 (HPLT_01740) | - | 339066..339329 (+) | 264 | WP_014534947.1 | hypothetical protein | - |
| HPLT_RS01715 (HPLT_01750) | - | 339631..340014 (+) | 384 | WP_000393581.1 | DUF1294 domain-containing protein | - |
| HPLT_RS01720 (HPLT_01755) | - | 340014..340799 (+) | 786 | WP_000488070.1 | hypothetical protein | - |
| HPLT_RS08155 (HPLT_01760) | - | 340789..341952 (+) | 1164 | WP_014534948.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15223.71 Da Isoelectric Point: 9.1627
>NTDB_id=46832 HPLT_RS01680 WP_000599192.1 336559..336963(+) (dprB) [Helicobacter pylori Lithuania75]
MILACDVGLKRIGIAALLNGVILPLEAILRRNKNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLVDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
MILACDVGLKRIGIAALLNGVILPLEAILRRNKNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLVDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
Nucleotide
Download Length: 405 bp
>NTDB_id=46832 HPLT_RS01680 WP_000599192.1 336559..336963(+) (dprB) [Helicobacter pylori Lithuania75]
GTGATTTTAGCATGCGATGTGGGGCTAAAACGCATTGGCATCGCTGCGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTACGCCGCAACAAAAATCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGAGAAAAAAACATTCAGGTGCTAGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGATACGAACGCGCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
GTGATTTTAGCATGCGATGTGGGGCTAAAACGCATTGGCATCGCTGCGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTACGCCGCAACAAAAATCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGAGAAAAAAACATTCAGGTGCTAGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGATACGAACGCGCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
97.015 |
100 |
0.97 |