Detailed information NTG0046792

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HMPREF4655_RS02770
• Genome accession: NC_017360
• Coordinates: 557923..558723 (+)
• Length: 266 a.a.
• NCBI ID: WP_000840090.1
• Uniprot ID: -
• Organism: Helicobacter pylori 35A
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 552923..563723

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HMPREF4655_RS02735 (HMPREF4655_20570)	pseH	553424..553966 (+)	543	WP_000742742.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HMPREF4655_RS02740 (HMPREF4655_20571)	-	553899..554837 (-)	939	WP_000833960.1	tetraacyldisaccharide 4'-kinase	-
HMPREF4655_RS02745 (HMPREF4655_20572)	-	554834..555616 (-)	783	WP_001168214.1	NAD+ synthase	-
HMPREF4655_RS02755 (HMPREF4655_20573)	ilvC	555864..556856 (+)	993	WP_001207776.1	ketol-acid reductoisomerase	-
HMPREF4655_RS02760 (HMPREF4655_20574)	minD	556875..557681 (+)	807	WP_001019098.1	septum site-determining protein MinD	-
HMPREF4655_RS02765 (HMPREF4655_20575)	minE	557678..557911 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HMPREF4655_RS02770 (HMPREF4655_20576)	dprA	557923..558723 (+)	801	WP_000840090.1	DNA-processing protein DprA	Machinery gene
HMPREF4655_RS02775 (HMPREF4655_20577)	dprB	558720..559124 (+)	405	WP_000599161.1	Holliday junction resolvase RuvX	Machinery gene
HMPREF4655_RS02780 (HMPREF4655_20578)	-	559236..559466 (+)	231	WP_147588954.1	tetratricopeptide repeat protein	-
HMPREF4655_RS02785 (HMPREF4655_20579)	-	559655..559993 (+)	339	WP_000699916.1	hypothetical protein	-
HMPREF4655_RS02790 (HMPREF4655_20580)	-	559977..560537 (+)	561	WP_000037143.1	hypothetical protein	-
HMPREF4655_RS08290	-	560548..560715 (+)	168	WP_080005298.1	lysozyme	-
HMPREF4655_RS08525	-	560937..561204 (+)	268	Protein_546	lysozyme	-
HMPREF4655_RS02805 (HMPREF4655_20584)	-	561254..561409 (+)	156	WP_014534571.1	hypothetical protein	-
HMPREF4655_RS02810 (HMPREF4655_20585)	-	561547..561933 (+)	387	WP_000397545.1	DUF1294 domain-containing protein	-
HMPREF4655_RS02815 (HMPREF4655_20586)	-	561933..562718 (+)	786	WP_000119816.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29797.72 Da
• Isoelectric Point: 8.8983

>NTDB_id=46792 HMPREF4655_RS02770 WP_000840090.1 557923..558723(+) (dprA) [Helicobacter pylori 35A]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDVPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKAIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEKKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=46792 HMPREF4655_RS02770 WP_000840090.1 557923..558723(+) (dprA) [Helicobacter pylori 35A]
ATGAAAAGCAATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGATCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGTGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACTCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGCGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATTGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTACCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAAAGAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTGGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414