Detailed information NTG0046750

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPCU_RS01935
• Genome accession: NC_017358
• Coordinates: 396414..397214 (+)
• Length: 266 a.a.
• NCBI ID: WP_000841120.1
• Uniprot ID: A0AB32X6X0
• Organism: Helicobacter pylori Cuz20
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 391414..402214

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPCU_RS01900 (HPCU_01965)	pseH	391911..392453 (+)	543	WP_000742580.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPCU_RS01905 (HPCU_01970)	-	392386..393324 (-)	939	WP_000833955.1	tetraacyldisaccharide 4'-kinase	-
HPCU_RS01910 (HPCU_01975)	-	393321..394103 (-)	783	WP_001168223.1	NAD+ synthase	-
HPCU_RS01920 (HPCU_01980)	ilvC	394350..395342 (+)	993	WP_001207784.1	ketol-acid reductoisomerase	-
HPCU_RS01925 (HPCU_01985)	minD	395366..396172 (+)	807	WP_001019023.1	septum site-determining protein MinD	-
HPCU_RS01930 (HPCU_01990)	minE	396169..396402 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
HPCU_RS01935 (HPCU_01995)	dprA	396414..397214 (+)	801	WP_000841120.1	DNA-processing protein DprA	Machinery gene
HPCU_RS01940 (HPCU_02000)	dprB	397211..397615 (+)	405	WP_000599165.1	Holliday junction resolvase RuvX	Machinery gene
HPCU_RS01945 (HPCU_02010)	-	397849..398658 (+)	810	WP_001059042.1	SEL1-like repeat protein	-
HPCU_RS01950 (HPCU_02015)	-	398848..399186 (+)	339	WP_000699928.1	hypothetical protein	-
HPCU_RS01955 (HPCU_02020)	-	399170..399736 (+)	567	WP_000037124.1	hypothetical protein	-
HPCU_RS01960 (HPCU_02025)	-	399748..399966 (+)	219	WP_014534202.1	lysozyme	-
HPCU_RS01970 (HPCU_02035)	-	400286..400672 (+)	387	Protein_386	DUF1294 domain-containing protein	-
HPCU_RS01975	-	400672..401458 (+)	787	Protein_387	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29712.57 Da
• Isoelectric Point: 8.5945

>NTDB_id=46750 HPCU_RS01935 WP_000841120.1 396414..397214(+) (dprA) [Helicobacter pylori Cuz20]
MKSNFQYSALENIPKAFGILKDPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHQVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=46750 HPCU_RS01935 WP_000841120.1 396414..397214(+) (dprA) [Helicobacter pylori Cuz20]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGGCATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCACCAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTGGAATACGAACTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.074	81.203	0.398