Detailed information NTG0046730

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPV225_RS01645
• Genome accession: NC_017355
• Coordinates: 331694..332494 (+)
• Length: 266 a.a.
• NCBI ID: WP_000841141.1
• Uniprot ID: -
• Organism: Helicobacter pylori v225d
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 326694..337494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPV225_RS01610 (HPV225_0346)	pseH	327190..327732 (+)	543	WP_000742585.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPV225_RS01615 (HPV225_0347)	-	327665..328603 (-)	939	WP_000833971.1	tetraacyldisaccharide 4'-kinase	-
HPV225_RS01620 (HPV225_0348)	-	328600..329382 (-)	783	WP_001168215.1	NAD+ synthase	-
HPV225_RS01630 (HPV225_0350)	ilvC	329630..330622 (+)	993	WP_001207779.1	ketol-acid reductoisomerase	-
HPV225_RS01635 (HPV225_0351)	minD	330646..331452 (+)	807	WP_001019042.1	septum site-determining protein MinD	-
HPV225_RS01640 (HPV225_0352)	minE	331449..331682 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HPV225_RS01645 (HPV225_0353)	dprA	331694..332494 (+)	801	WP_000841141.1	DNA-processing protein DprA	Machinery gene
HPV225_RS01650	dprB	332491..332895 (+)	405	WP_000599160.1	Holliday junction resolvase RuvX	Machinery gene
HPV225_RS01655 (HPV225_0355)	-	333023..333841 (+)	819	WP_014533630.1	tetratricopeptide repeat protein	-
HPV225_RS01660 (HPV225_0356)	-	333885..334223 (+)	339	WP_000699914.1	hypothetical protein	-
HPV225_RS01665 (HPV225_0357)	-	334207..334767 (+)	561	WP_000037128.1	hypothetical protein	-
HPV225_RS08305 (HPV225_0358)	-	335023..335448 (+)	426	WP_238523865.1	hypothetical protein	-
HPV225_RS01675 (HPV225_0360)	-	335766..336151 (+)	386	Protein_322	DUF1294 domain-containing protein	-
HPV225_RS01680 (HPV225_0361)	-	336151..336936 (+)	786	WP_000488081.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29798.70 Da
• Isoelectric Point: 8.5925

>NTDB_id=46730 HPV225_RS01645 WP_000841141.1 331694..332494(+) (dprA) [Helicobacter pylori v225d]
MKSNFQYSVLENIPKAFDILKDPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=46730 HPV225_RS01645 WP_000841141.1 331694..332494(+) (dprA) [Helicobacter pylori v225d]
ATGAAAAGCAACTTCCAATACAGCGTGCTAGAGAATATCCCTAAGGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACGAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGTGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATACGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAATCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGTGCCAAAAATCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAACTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.537	81.203	0.402