Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H0S56_RS03570 Genome accession   NZ_CP059081
Coordinates   760878..761261 (+) Length   127 a.a.
NCBI ID   WP_064096414.1    Uniprot ID   -
Organism   Acinetobacter lwoffii strain 12CE1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 755878..766261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0S56_RS03560 (H0S56_03560) - 758765..759892 (-) 1128 WP_195725675.1 efflux RND transporter periplasmic adaptor subunit -
  H0S56_RS03565 (H0S56_03565) - 759944..760591 (-) 648 WP_191112538.1 hypothetical protein -
  H0S56_RS03570 (H0S56_03570) pilG 760878..761261 (+) 384 WP_064096414.1 twitching motility response regulator PilG Regulator
  H0S56_RS03575 (H0S56_03575) - 761289..761657 (+) 369 WP_064096413.1 response regulator -
  H0S56_RS03580 (H0S56_03580) - 761663..762199 (+) 537 WP_064096412.1 chemotaxis protein CheW -
  H0S56_RS03585 (H0S56_03585) - 762246..764318 (+) 2073 WP_195725676.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14302.39 Da        Isoelectric Point: 4.7172

>NTDB_id=467123 H0S56_RS03570 WP_064096414.1 760878..761261(+) (pilG) [Acinetobacter lwoffii strain 12CE1]
MDDKFQNLKIMVIDDSKTIRRTAETLLQREGYEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLTAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=467123 H0S56_RS03570 WP_064096414.1 760878..761261(+) (pilG) [Acinetobacter lwoffii strain 12CE1]
ATGGACGATAAATTCCAAAATCTAAAAATTATGGTTATTGATGACTCAAAGACCATTCGTCGTACTGCAGAAACTCTTCT
TCAGCGTGAAGGTTATGAAGTCATTACTGCGGTAGATGGTTTTGAGGCTTTATCAAAAATTGCCGAAGCAAATCCAGATA
TCGTTTTTGTAGATATTATGATGCCGCGCCTAGATGGTTATCAGACCTGCGCCTTAATCAAAAACTCTCAGAATTACCAG
AATATTCCTGTGATTATGCTATCAAGTAAAGATGGCTTATTTGATCAGGCCAAAGGTCGTGTCGTGGGTTCCGATGAATA
CCTGACCAAACCTTTTAGTAAAGATGAATTGCTAACTGCAATCCGTAACCATATTAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

94.488

100

0.945
  vicR Streptococcus mutans UA159

44.444

92.126

0.409
  pilH Synechocystis sp. PCC 6803

40.708

88.976

0.362