Detailed information NTG0467071

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: H0S57_RS01360
• Genome accession: NZ_CP059080
• Coordinates: 309581..310945 (-)
• Length: 454 a.a.
• NCBI ID: WP_373868094.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain E10B
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 304581..315945

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0S57_RS01345 (H0S57_01345)	lptG	305641..306711 (+)	1071	WP_004692843.1	LPS export ABC transporter permease LptG	-
H0S57_RS01350 (H0S57_01350)	gpmI	306835..308382 (+)	1548	WP_004692841.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
H0S57_RS01355 (H0S57_01355)	-	308401..309576 (+)	1176	WP_151835731.1	S41 family peptidase	-
H0S57_RS01360 (H0S57_01360)	pilR	309581..310945 (-)	1365	WP_373868094.1	sigma-54-dependent transcriptional regulator	Regulator
H0S57_RS01365 (H0S57_01365)	pilS	311018..312586 (-)	1569	WP_151835729.1	nitrogen regulation protein NR(II)	Regulator
H0S57_RS01370 (H0S57_01370)	-	312608..313243 (-)	636	WP_004692836.1	response regulator	-
H0S57_RS01375 (H0S57_01375)	-	313459..314514 (+)	1056	WP_125273423.1	serine hydrolase	-
H0S57_RS01380 (H0S57_01380)	thrC	314602..315741 (-)	1140	WP_125273422.1	threonine synthase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51029.75 Da
• Isoelectric Point: 6.8692

>NTDB_id=467071 H0S57_RS01360 WP_373868094.1 309581..310945(-) (pilR) [Acinetobacter johnsonii strain E10B]
MQMSLSRMGIDTHIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLSLVDFIAQNYPNLPVAVLTAYGNMDIAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPISQLHIQEDTLEHRLLIGQSLPIQQLRIILKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYANATQQGAVGNDQLSHVPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=467071 H0S57_RS01360 WP_373868094.1 309581..310945(-) (pilR) [Acinetobacter johnsonii strain E10B]
ATGCAAATGTCTTTAAGTCGGATGGGGATTGATACACATATTGCCTATCGCTTACAAGAGGCGGTTCAAGCCCTGAAAAC
GCATCAATATGATGCCTGTCTAACCGATCTTAATTTACCCGATGGTAATGGCCTGAGTTTGGTCGATTTTATTGCTCAAA
ATTATCCTAATTTACCCGTTGCAGTGCTGACGGCTTACGGCAATATGGATATTGCGATTGCAGCACTGAAAGCTGGTGCT
TTTGATTTTGTCAGTAAACCGATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCCTTTAATCAGCCCATCAGTCA
GCTGCATATCCAAGAAGATACGCTTGAACATCGTCTGCTGATTGGTCAGTCTCTTCCTATTCAGCAGCTACGCATCATCT
TAAAGAAAATTGCACGTTCGCAAGCTCCTGTCTTTATTACGGGTGAATCAGGCACTGGCAAAGAAGTGGTGGCTAATCTG
GTACATCGCCTGAGCAATCGTAATGAAGGGCCATTTATTGCCATTAACTGCGGTGCCATACCGACTGAACTGATGGAAAG
TGAATTGTTTGGACACCGTAAGGGTAGCTTTACAGGGGCGACTCAAGACAAACAAGGGCTGATTCTGTCTGCGCATGGCG
GCAGTTTATTTTTAGATGAAATTGCTGAGTTACCGCTCACTATGCAGGTGAAACTGCTGCGTGCGGTACAAGAAAAACGC
ATTCGCCCAATTGGGAGTGACACCGAAATTGATGTCGATTTTCGTGTGATTAGTGCCAGCCATCAAGACCTAGAAGCACT
GGTGCAACAAGGCAAGTTCCGTCAGGATTTATACTTCCGCATCCATGTCATGGACATTGTACTGCCTGCCCTACGTGAGC
GTGGCAATGACATTATTCTTTTGGCACAACATTTCATTCAAAAAATCTGCCAAGAATGGGACATCCCAGTCAAACCACTG
AGTGAACGTGCACGTGAGTTTTTATTGGCCCAATATTATCCAGGCAATGTGCGTGAACTACGCAATATGATGGAACGTGC
CATCACTTTAAGTGATGAAAGCAGTATCGACTTACCACACTTGCAAACAGCCCCACTGCGACCAATTGCTCAGACCAATT
ATGCCAATGCCACGCAACAAGGTGCTGTTGGCAATGATCAACTCAGTCATGTGCCTTCGCGTAAATTACCCGAAGAGGGT
TTAGAGCTGTATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTCACCCACTGGAACCGAACACTGGC
GGCTAAAAAGCTCGGTATGTCTTTCCGCTCTTTACGTTATCGCTTGAAGAAATTCGGACTCGATGGCGAAGATGATTCCG
TTTAG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

• Response regulator receiver domain (Response_reg) (4-97)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.67	100	0.747
pilR	Pseudomonas aeruginosa PAK	49.446	99.339	0.491