Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   H0S58_RS05175 Genome accession   NZ_CP059079
Coordinates   1126361..1127068 (-) Length   235 a.a.
NCBI ID   WP_053578185.1    Uniprot ID   A0A1C4GWR3
Organism   Acinetobacter sp. TTH0-4 strain 1BD1     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1121361..1132068
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0S58_RS05155 (H0S58_05155) - 1122250..1123569 (+) 1320 WP_053578189.1 adenylosuccinate synthase -
  H0S58_RS05160 (H0S58_05160) - 1123759..1124067 (+) 309 WP_053578188.1 hypothetical protein -
  H0S58_RS05165 (H0S58_05165) - 1124181..1124957 (+) 777 WP_053578187.1 M48 family metallopeptidase -
  H0S58_RS05170 (H0S58_05170) - 1125106..1126155 (-) 1050 WP_195727339.1 NADP(H)-dependent aldo-keto reductase -
  H0S58_RS05175 (H0S58_05175) crp 1126361..1127068 (-) 708 WP_053578185.1 cAMP-activated global transcriptional regulator CRP Regulator
  H0S58_RS05180 (H0S58_05180) - 1127217..1127639 (+) 423 WP_092720598.1 OsmC family protein -
  H0S58_RS05185 (H0S58_05185) clpB 1128076..1130658 (+) 2583 WP_195727340.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26417.12 Da        Isoelectric Point: 4.6838

>NTDB_id=467041 H0S58_RS05175 WP_053578185.1 1126361..1127068(-) (crp) [Acinetobacter sp. TTH0-4 strain 1BD1]
MTANFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTAIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANSQRTAEVRTRDVCEIAEISYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETEGKAILIFDVASEEIDSSLIKDEDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=467041 H0S58_RS05175 WP_053578185.1 1126361..1127068(-) (crp) [Acinetobacter sp. TTH0-4 strain 1BD1]
ATGACTGCAAACTTTTCACAACTCAGTACAGACGCCCTTTCTCCTGGTCAATTACCAGAGTCTGTTAAAGCATTGTTAAA
ACGTGCCTATATTAACCGCTACCCAAAGCGCACTGCGATTGTAGATGCAGGAACTGAATCTAAATCACTGTATTTAATTT
TAAAAGGTTCAGTTTCTATTATTTTACGTGAAGATGATGAACGTGAAATTGTGGTTGCCTATTTAAATGCAGGGGACTTT
TTTGGGGAAATGGGCCTATTTGAAGCTAACTCACAACGTACTGCCGAAGTTCGCACACGTGACGTATGTGAAATTGCTGA
AATAAGCTATGAGAATTTCCATGAATTGAGCAAACAGTATCCCGATTTAAGCTATGCCGTTTTTGCACAGCTCGTACGTC
GCTTAAAAAATACCACACGTAAAGTGACTGACCTTGCATTTATCGATGTATCTGGACGTATTGCACGCTGTTTAATCGAC
CTTTCATCTCAACCTGAAGCTATGATTTTACCCAATGGTCGTCAAATTCGGATTACTCGTCAAGAAATTGGACGTATTGT
CGGCTGTTCCCGCGAAATGGTCGGACGTGTTTTAAAAACGCTTGAAGAACAAGGCATGATCGAAACAGAAGGCAAAGCCA
TTCTTATTTTTGATGTGGCTTCAGAAGAGATAGATTCTTCGCTCATTAAAGATGAGGATGAAGAATAA

Domains

Predicted by InterproScan.

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-220)

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1C4GWR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

90.987

99.149

0.902
  crp Vibrio cholerae strain A1552

47.317

87.234

0.413
  crp Haemophilus influenzae Rd KW20

48.705

82.128

0.4