Detailed information NTG0467039

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: H0S58_RS04315
• Genome accession: NZ_CP059079
• Coordinates: 936003..938432 (+)
• Length: 809 a.a.
• NCBI ID: WP_195727253.1
• Uniprot ID: -
• Organism: Acinetobacter sp. TTH0-4 strain 1BD1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	935234..943119	936003..938432	within	0

Gene organization within MGE regions

Location: 935234..943119

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0S58_RS04310 (H0S58_04310)	lolD	935234..935917 (+)	684	WP_053578343.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
H0S58_RS04315 (H0S58_04315)	comA/comEC	936003..938432 (+)	2430	WP_195727253.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
H0S58_RS04320 (H0S58_04320)	-	938429..939385 (-)	957	WP_195727254.1	lysophospholipid acyltransferase family protein	-
H0S58_RS04325 (H0S58_04325)	sppA	939515..940540 (+)	1026	WP_193893176.1	signal peptide peptidase SppA	-
H0S58_RS04330 (H0S58_04330)	-	940537..941343 (+)	807	WP_195727255.1	alpha/beta fold hydrolase	-
H0S58_RS04335 (H0S58_04335)	purN	941413..942042 (-)	630	WP_053578338.1	phosphoribosylglycinamide formyltransferase	-
H0S58_RS04340 (H0S58_04340)	purM	942052..943119 (-)	1068	WP_195727256.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 809 a.a.
• Molecular weight: 93317.71 Da
• Isoelectric Point: 8.5963

>NTDB_id=467039 H0S58_RS04315 WP_195727253.1 936003..938432(+) (comA/comEC) [Acinetobacter sp. TTH0-4 strain 1BD1]
MIQFICVGWIIGIATMGRSFPTLELLLLPSIFLLILALILQLTIFKKVHSLWFKFFQFVLAFIFSLTLGAHFAALQLNER
LQFREKMPDQTEIIVHIKTLNQLSDQSIQQKVHVLNRHSEVVQWQTFQKNEAALNVQPKLELGHYYRMQGQTRPAHSYAT
QGAFDQEKWYIQQNIMSGFKVVTVQELSEQDIYRLGYSRYLRAQHGYLQQIKLGIERQRLALRNFIDQQPLRHKGLLLAL
LTGDQSLLHTDTENLFQRFGMSHLLAISGPHVLIFALLFCWATHHLICRYWPDLYLTWPKQYLLIVPFCICVLFYCAFVG
FEIPALRTLLSCLLITTFILLKQKIQPLSILLLSASILLIFDPFSILSAAFWLSYGACFVLLRIYQTVQQQSRTAEVKRK
TQTLKIQLKILIEAQWKIFLALFPLMIIFFKQIAWITPLSNLFAIPWISVVIVPLDILASLGYFIFEPLGSIIFQINDLC
IAILLMFMQILDHVFSPTLQPVAMNFWVLLSMCLGLIILFLPRGIVPKTWSILCFLPFILIDSTKNGFELSVLDVGQGQA
IFIRDQAQTLMVDTGGNYDETKFSVGKQIILPFLSVKGVSELNQLILTHLDQDHSGAYETIKQDLKVQQVYSNEQIDVAE
SSQFNYCHQGQEWYWQNNEIIMTVLSPSKEHLANAKHEKNEYSCVLYLQVKNAQPYQNFLLMGDAGWQTEYNILQDYPDL
KVDVLLLGHHGSRHSSAYAFLKQLNPKIAIASAGFTNRYGHPSVILEARLKALNIPLITTIEKGSIHFSKHQNKMLIEFE
RDTRHWLKR

Nucleotide

• Length: 2430 bp

>NTDB_id=467039 H0S58_RS04315 WP_195727253.1 936003..938432(+) (comA/comEC) [Acinetobacter sp. TTH0-4 strain 1BD1]
ATGATTCAATTTATATGTGTCGGTTGGATAATCGGTATTGCAACAATGGGGCGAAGTTTTCCTACACTAGAGTTATTGCT
GCTGCCCAGTATTTTTCTTTTGATTCTCGCTTTAATTTTACAACTGACTATTTTTAAAAAAGTTCACTCTTTGTGGTTTA
AATTTTTTCAATTTGTTTTAGCATTTATTTTTAGTCTCACTTTGGGTGCACATTTTGCAGCGCTTCAACTGAATGAGCGG
TTGCAATTTCGAGAAAAAATGCCTGACCAGACCGAAATTATTGTTCATATCAAAACCTTGAATCAATTGAGTGATCAATC
GATTCAACAAAAAGTTCATGTGTTGAATCGGCATAGTGAAGTTGTGCAATGGCAAACATTTCAAAAAAATGAAGCAGCAT
TGAATGTTCAACCCAAACTTGAACTGGGGCATTACTATCGTATGCAAGGTCAAACGCGACCTGCTCACAGTTATGCCACT
CAAGGTGCATTTGACCAAGAAAAATGGTATATCCAGCAAAATATTATGTCAGGTTTTAAAGTTGTAACCGTGCAAGAACT
CTCCGAGCAAGATATTTATCGTTTAGGATATAGCCGTTATCTGAGAGCTCAGCATGGTTATCTTCAGCAGATTAAACTTG
GCATAGAACGACAGCGTTTGGCCTTAAGAAATTTTATTGATCAGCAACCATTACGACATAAAGGACTGCTGTTAGCCTTG
TTAACAGGTGATCAAAGTTTACTTCACACTGATACCGAAAATTTATTTCAACGTTTTGGGATGAGTCATTTATTGGCAAT
CTCTGGGCCACATGTACTGATTTTTGCTTTATTATTCTGTTGGGCGACGCATCATTTAATTTGTCGTTATTGGCCTGATC
TTTATTTAACATGGCCAAAGCAATATCTGTTGATTGTGCCATTTTGTATCTGTGTTTTGTTCTATTGTGCCTTTGTTGGA
TTTGAAATTCCAGCGCTAAGAACATTACTGAGTTGCTTATTAATCACTACATTCATTCTATTAAAACAAAAAATTCAACC
GCTCAGTATTTTGCTATTGAGTGCCTCTATCTTATTAATTTTTGATCCATTCAGTATTTTATCCGCAGCTTTTTGGTTGT
CATATGGTGCATGTTTTGTACTATTAAGAATTTATCAAACTGTACAGCAGCAAAGCCGCACGGCTGAGGTAAAAAGGAAG
ACGCAAACACTCAAAATACAACTGAAAATATTAATCGAAGCCCAATGGAAAATATTTTTAGCCTTATTTCCTTTAATGAT
TATTTTCTTTAAACAAATTGCGTGGATTACGCCTTTGAGTAATCTGTTTGCTATTCCGTGGATTAGCGTAGTGATTGTGC
CTTTGGATATTCTTGCATCACTGGGTTATTTTATTTTTGAGCCTTTGGGGAGTATTATTTTTCAGATCAATGATTTATGT
ATCGCTATCTTACTCATGTTTATGCAGATTTTAGATCATGTTTTTTCACCAACATTACAGCCTGTTGCAATGAATTTTTG
GGTATTACTGAGCATGTGCTTAGGTTTGATTATCCTATTTTTACCCCGTGGTATTGTTCCTAAAACATGGTCTATCTTAT
GTTTTTTACCATTCATTCTGATAGATTCGACGAAAAATGGGTTTGAATTGTCTGTGCTTGATGTCGGTCAAGGACAAGCT
ATTTTTATTCGTGATCAAGCACAAACTTTAATGGTAGATACAGGTGGGAATTATGATGAAACTAAATTTAGTGTCGGTAA
GCAAATCATTCTGCCATTTTTGTCCGTTAAAGGGGTAAGCGAGTTAAATCAACTGATTTTGACTCATTTAGACCAAGATC
ATAGCGGTGCATATGAAACCATTAAACAAGATTTAAAGGTTCAACAGGTCTATTCCAATGAACAGATCGACGTAGCAGAG
TCAAGCCAGTTTAATTATTGTCATCAAGGGCAGGAGTGGTATTGGCAAAATAATGAAATTATAATGACAGTTTTATCGCC
AAGCAAAGAACATTTGGCAAATGCGAAACATGAAAAAAATGAATATTCCTGCGTGCTTTATTTACAAGTAAAAAATGCTC
AACCCTATCAAAATTTTCTGTTAATGGGCGATGCGGGATGGCAAACTGAATATAACATTTTACAAGATTATCCTGATTTA
AAGGTTGATGTGCTCTTGCTTGGACATCATGGAAGTCGGCATAGTTCTGCCTATGCTTTCTTAAAACAATTAAATCCGAA
AATTGCTATTGCATCCGCAGGTTTTACGAACCGTTACGGGCATCCAAGTGTCATACTTGAAGCACGTTTAAAAGCTTTGA
ATATTCCTTTAATTACGACGATAGAAAAAGGCAGTATTCATTTCTCAAAGCATCAAAATAAGATGTTGATTGAATTTGAA
CGTGATACAAGGCACTGGTTAAAGCGTTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (240-523)

• Metallo-beta-lactamase superfamily (Lactamase_B) (554-634)

• Domain of unknown function (DUF4131) (DUF4131) (23-185)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	49.14	100	0.494
comA/comEC	Acinetobacter baumannii strain A118	48.649	100	0.489
comA/comEC	Acinetobacter baylyi ADP1	47.181	100	0.476