Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H0S58_RS03470 Genome accession   NZ_CP059079
Coordinates   752115..752498 (+) Length   127 a.a.
NCBI ID   WP_092717291.1    Uniprot ID   -
Organism   Acinetobacter sp. TTH0-4 strain 1BD1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 747115..757498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0S58_RS03460 (H0S58_03460) - 750018..751061 (-) 1044 WP_411164069.1 efflux RND transporter periplasmic adaptor subunit -
  H0S58_RS03465 (H0S58_03465) - 751197..751838 (-) 642 WP_195727154.1 hypothetical protein -
  H0S58_RS03470 (H0S58_03470) pilG 752115..752498 (+) 384 WP_092717291.1 twitching motility response regulator PilG Regulator
  H0S58_RS03475 (H0S58_03475) - 752522..752890 (+) 369 WP_053578506.1 response regulator -
  H0S58_RS03480 (H0S58_03480) - 752897..753433 (+) 537 WP_053578505.1 chemotaxis protein CheW -
  H0S58_RS03485 (H0S58_03485) - 753476..755548 (+) 2073 WP_195727155.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14299.39 Da        Isoelectric Point: 4.7172

>NTDB_id=467037 H0S58_RS03470 WP_092717291.1 752115..752498(+) (pilG) [Acinetobacter sp. TTH0-4 strain 1BD1]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGFEVVTAVDGFEALSKIAEVNPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=467037 H0S58_RS03470 WP_092717291.1 752115..752498(+) (pilG) [Acinetobacter sp. TTH0-4 strain 1BD1]
ATGGACGATAAATTCCAAAATCTAAAAGTCATGGTAATTGATGATTCAAAAACGATTCGCCGTACTGCAGAAACATTATT
ACAGCGTGAAGGATTTGAAGTAGTCACAGCAGTAGACGGTTTTGAGGCATTATCAAAAATTGCAGAAGTTAATCCTGATA
TTGTATTTGTCGATATCATGATGCCACGCTTAGACGGTTATCAAACGTGTGCATTAATTAAAAACTCTCAAAATTATCAA
AATATTCCTGTGATTATGTTATCGAGTAAAGATGGCTTATTTGATCAGGCGAAAGGTCGGGTTGTTGGTTCAGATGAGTA
TTTAACCAAACCTTTTAGTAAAGACGAATTATTAAATGCAATTCGAAATCACGTCACCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

94.488

100

0.945
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37