Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   HZ310_RS03930 Genome accession   NZ_CP058951
Coordinates   787509..789821 (+) Length   770 a.a.
NCBI ID   WP_180310170.1    Uniprot ID   -
Organism   Bacillus pumilus strain UAMX     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 782509..794821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZ310_RS03905 (HZ310_03905) - 783965..785191 (+) 1227 WP_012011110.1 EAL and HDOD domain-containing protein -
  HZ310_RS03910 (HZ310_03910) - 785223..785576 (-) 354 WP_034620108.1 hypothetical protein -
  HZ310_RS03915 (HZ310_03915) degQ 786082..786222 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  HZ310_RS03920 (HZ310_03920) - 786374..787288 (+) 915 WP_180310169.1 polyprenyl synthetase family protein -
  HZ310_RS03925 (HZ310_03925) comX 787285..787455 (+) 171 WP_098677614.1 competence pheromone ComX -
  HZ310_RS03930 (HZ310_03930) comP 787509..789821 (+) 2313 WP_180310170.1 ATP-binding protein Regulator
  HZ310_RS03935 (HZ310_03935) comA 789902..790543 (+) 642 WP_058013793.1 response regulator transcription factor Regulator
  HZ310_RS03940 (HZ310_03940) - 790567..790956 (+) 390 WP_003213775.1 hotdog fold thioesterase -
  HZ310_RS03945 (HZ310_03945) mnhG 791044..791418 (-) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  HZ310_RS03950 (HZ310_03950) - 791402..791683 (-) 282 WP_012011105.1 Na(+)/H(+) antiporter subunit F1 -
  HZ310_RS03955 (HZ310_03955) - 791683..792162 (-) 480 WP_058013794.1 Na+/H+ antiporter subunit E -
  HZ310_RS03960 (HZ310_03960) - 792169..793647 (-) 1479 WP_058013795.1 Na+/H+ antiporter subunit D -
  HZ310_RS03965 (HZ310_03965) - 793640..793981 (-) 342 WP_058013796.1 Na(+)/H(+) antiporter subunit C -
  HZ310_RS03970 (HZ310_03970) - 793981..794412 (-) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89568.09 Da        Isoelectric Point: 7.0968

>NTDB_id=466075 HZ310_RS03930 WP_180310170.1 787509..789821(+) (comP) [Bacillus pumilus strain UAMX]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYLIPLILYSICLFCIFFIIRINKEAQRKSAFLLVLFLLTICIGY
LSAGTSGIGERFSHYVIVFCLSSVFIFYIHFIYQYFKEFDLHITTQKTIRFLYSLPIINLVIELFVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMRKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFLAITPTIFVVVTFYILQKPEDLKYTLKLALITYALMLAVFYFKEILDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKPDGQIEEIDESSGDRNLWKEYVDQFQEILGEVGKI
IELDKGFMMKIGERGGHSFVICCLSNLQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSQASQVLVMLICIKDQVVLHYEDD
GVGFDASHLDQHTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=466075 HZ310_RS03930 WP_180310170.1 787509..789821(+) (comP) [Bacillus pumilus strain UAMX]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTGGTTTTTCTATCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTAGCGGAGAACAAGAACGGTCAAGCAGAAGTTGTCAAAGTTGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGGGAACCTGCTAACAACAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATTTAATTCCTCTCATCCTGTATTCAATTTGTTTATTTTGTATCTTCTTTA
TCATTCGAATTAACAAAGAGGCCCAACGAAAATCAGCATTTCTATTAGTTTTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCAGGGATTGGTGAGAGATTTAGCCATTATGTGATCGTATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATAACGACTCAAAAAACAATTCGCTTTTTATATA
GTCTTCCTATAATTAATCTAGTAATAGAGTTATTTGTTCCGATTGATTCGGCGATAGCCAGATACATGCCAAGTTTAAAT
CTTTTATTCTTTTTCGCTTCTATTATCATGTCATTCAAAGTGATTATCAATGGAATGCGGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATAAATATCATAGCATTTTGTCCTTTTATATTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTGGTAGATCCCTTTTTCTTAACTTCTTTTGTCTTGCTCATTCCTTTTTCACTCGTGTATCAA
TTTATGACGAACAAGCTTTACAACATGGATTTTTTGATAAGCAGACTGAAATACTATGGCTTTCTAGCCATTACACCGAC
CATTTTTGTTGTCGTCACGTTTTACATTTTGCAGAAACCAGAAGATTTGAAGTACACCCTGAAGCTCGCATTAATCACCT
ATGCGCTTATGCTTGCTGTCTTTTATTTTAAAGAAATTCTAGATTTCCGCTTCCGTCTGAAACGTTTTTCAGAGAAGCAT
AATTATCAGGACAGTGTGTTTAAATTTACTCAGCTCATTCGTGAGGCATCATCACTTCACCAAGTGCTATATCATTTGAA
ATACACCATTTTAGAAGTGCTGGTTGTGAATAAAGCCTTTGTACTTGAAGTGAAGCCAGATGGACAGATTGAAGAGATTG
ATGAATCTTCAGGTGATAGAAATCTATGGAAAGAGTATGTGGATCAATTTCAAGAGATTTTAGGGGAAGTCGGGAAAATC
ATAGAGCTTGATAAAGGGTTCATGATGAAAATTGGCGAGCGGGGCGGTCACTCATTTGTGATTTGCTGTTTATCCAATTT
ACAGACACCAAAATTGACGCGTGATGAGATTTCTTGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATG
TCGTCAAGATTGAAGAATTGATGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAACCCCGCTTGGCTGAAAAAAGTC
ATGTTTGCGATGGAGGAAAAGCAGCGCTCCGATTTAGCGAGGGATCTTCATGATTCCGTGCTGCAGGATTTGATATCGCT
GAAAAGACAGTCAGAGATGTTTTTAACGAATTTCCAAAACGATCAATGCCCGACGTCTATTGAACAATCGCTTATCTCAT
GGAATGAACAAATGTCTAAGGTGATTCAAACGACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTGCTGTACGATTTA
GGTTTAGTGAAGGCGATATCGAAGCTGACTTCTCAAATTCAGGAGGAAGCACCATTTCATATTCGGCTGAATACGACACG
CTTTGATAAGGAGCTGGACATTGATATTGACTCCCAGCTTAATATTTACCGGATTGTTCAAGAGCTGTTATCCAATGCCT
TGAAACACTCTCAAGCCAGCCAAGTGCTCGTAATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTATGAGGATGAT
GGGGTTGGTTTTGACGCAAGCCATCTTGATCAGCACACCATGAGCATGGGCCTCTCTGGAATCAGAGAACGAGTCAAGGC
GTTAAATGGGAAGCTTCACATTCACACAGCACCTGAAAAAGGGCTGAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.903

100

0.492