Detailed information NTG0465236

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SSU10_RS00780
• Genome accession: NZ_CP058742
• Coordinates: 122744..123178 (+)
• Length: 144 a.a.
• NCBI ID: WP_011922561.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 10
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 117744..128178

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU10_RS00745 (SSU10_00153)	-	118490..118855 (+)	366	WP_002936568.1	DUF1033 family protein	-
SSU10_RS00750 (SSU10_00154)	-	118890..119836 (-)	947	Protein_115	S66 peptidase family protein	-
SSU10_RS00755 (SSU10_00155)	comYA	119922..120872 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
SSU10_RS00760 (SSU10_00156)	comYB	120784..121821 (+)	1038	WP_011921719.1	competence type IV pilus assembly protein ComGB	Machinery gene
SSU10_RS00765 (SSU10_00157)	comYC	121823..122104 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
SSU10_RS00770 (SSU10_00158)	comGD	122085..122492 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
SSU10_RS00775 (SSU10_00159)	comYE	122464..122757 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
SSU10_RS00780 (SSU10_00160)	comGF/cglF	122744..123178 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
SSU10_RS00785 (SSU10_00161)	comGG	123156..123566 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
SSU10_RS00790 (SSU10_00162)	comYH	123623..124576 (+)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
SSU10_RS00795 (SSU10_00163)	-	124626..125813 (+)	1188	WP_012775422.1	acetate kinase	-
SSU10_RS00800 (SSU10_00164)	-	126128..126679 (+)	552	WP_012774908.1	folate family ECF transporter S component	-
SSU10_RS00805 (SSU10_00165)	-	126735..127991 (+)	1257	WP_011921729.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16491.85 Da
• Isoelectric Point: 5.9234

>NTDB_id=465236 SSU10_RS00780 WP_011922561.1 122744..123178(+) (comGF/cglF) [Streptococcus suis strain 10]
MLKSKIPAFTLLECLVVLVILSGSLLIFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=465236 SSU10_RS00780 WP_011922561.1 122744..123178(+) (comGF/cglF) [Streptococcus suis strain 10]
TTGTTAAAAAGTAAAATTCCTGCTTTTACACTCTTGGAATGTTTGGTGGTTCTAGTCATTCTGTCAGGTAGCCTCTTGAT
TTTTGAAGGCTTATCCAAATTACTAGTCCAGGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae Rx1	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae D39	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae R6	52.482	97.917	0.514
comGF/cglF	Streptococcus mitis NCTC 12261	52.985	93.056	0.493
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF/cglF	Streptococcus mitis SK321	50	93.056	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444