Detailed information NTG0465085

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: HYO64_RS17375
• Genome accession: NZ_CP058729
• Coordinates: 3629917..3631338 (+)
• Length: 473 a.a.
• NCBI ID: WP_096641157.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain M164-3
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3624917..3636338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HYO64_RS17355	thrC	3625171..3626310 (+)	1140	WP_114153491.1	threonine synthase	-
HYO64_RS17360	pbpG	3626419..3627465 (-)	1047	WP_001984577.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
HYO64_RS17365	-	3627678..3628313 (+)	636	WP_000633799.1	response regulator transcription factor GacA	-
HYO64_RS17370	pilS	3628324..3629892 (+)	1569	WP_057065334.1	sensor histidine kinase	Regulator
HYO64_RS17375	pilR	3629917..3631338 (+)	1422	WP_096641157.1	sigma-54-dependent transcriptional regulator	Regulator
HYO64_RS17380	-	3631342..3632526 (-)	1185	WP_004842752.1	S41 family peptidase	-
HYO64_RS17385	gpmI	3632542..3634089 (-)	1548	WP_000128745.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
HYO64_RS17390	lptG	3634215..3635285 (-)	1071	WP_000881094.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 53030.24 Da
• Isoelectric Point: 6.5588

>NTDB_id=465085 HYO64_RS17375 WP_096641157.1 3629917..3631338(+) (pilR) [Acinetobacter baumannii strain M164-3]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGIDLVKHVSQNYPNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKALNRQKVEHDFAESALENKLLIGCSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLILPPLRERGEDVLL
LANHFIQKICMEWETPPKQLTEAAETYLLQQHFPGNVRELRNMIERAITLSEDTTIDVSHLHPAPLRANISNPFASVAQS
IQTTVAAPQVVKKLPSEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV

Nucleotide

• Length: 1422 bp

>NTDB_id=465085 HYO64_RS17375 WP_096641157.1 3629917..3631338(+) (pilR) [Acinetobacter baumannii strain M164-3]
ATGGCAGAACAGCAACCACTGGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTTTTAATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCACTCAGTTTCATTACGATGCGTGTT
TAACCGACTTAAACCTACCCGATGGGAGCGGGATAGATTTAGTTAAACATGTCTCTCAAAATTATCCCAACACTCCGATT
GCGGTTTTAACTGCTTACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGTGCTTTTGATTTTGTAAGCAAACC
GGTCAACCAAGTACATCTAGATCAATTATTACAAAAAGCCTTGAATCGGCAAAAAGTAGAGCATGATTTTGCCGAGAGTG
CTTTAGAAAACAAATTATTAATCGGTTGTTCTCTGCCTATTCAACAGTTACGCATCGCAATTAAAAAAATTGCTCGCTCT
CAAGCACCGGTATTTGTTACCGGTGAGTCTGGAACAGGTAAAGAAGTAGTTGCCAATTTGGTTCATCGGCTGAGTAACCG
TAGTGAAGGCCCTTTTATTGCGATTAACTGCGGTGCCATTCCAACTGAACTGATGGAAAGTGAGCTATTTGGGCATAAAA
AAGGTAGCTTTACCGGAGCAACTCAAGATAAACAAGGCCTCATTTTATCGGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTACCTTTAAGTATGCAGGTCAAACTGCTCCGTGCAGTACAGGAAAAAAAGATCCGACCTGTCGGTTCAGA
TCAGGAAATCGATGTTGATTTCCGTGTGATTAGTGCAAGTCATCAAGATTTAGATTTATTGGTTAGACAGGGCAAATTCC
GTCAAGATTTATTTTTCCGTATTCACGTTATGGACCTCATATTGCCGCCTCTACGTGAACGTGGCGAAGATGTCCTTTTG
CTTGCCAATCACTTTATTCAGAAAATTTGTATGGAGTGGGAAACGCCACCTAAACAATTAACAGAAGCGGCCGAAACTTA
TCTGCTACAGCAACACTTTCCGGGTAATGTTCGTGAATTAAGAAATATGATTGAGCGCGCAATTACCTTAAGTGAAGATA
CCACTATAGATGTATCTCATTTACATCCTGCTCCACTAAGAGCAAATATTTCTAATCCTTTTGCTTCGGTTGCTCAAAGC
ATACAAACCACTGTGGCAGCTCCTCAAGTCGTAAAAAAATTACCAAGTGAAGGCTTAGAACGTTATTTAGAAAATATTGA
AAAAGATATTTTACTCAATGCACTCAATATGACTCATTGGAATCGTACCTTAGCAGCTAAAAAATTAGGAATGACTTTCC
GCTCTTTACGCTATCGTCTGAAAAAATTTGGCTTAGATACGGAGACAGAACAGGAAGTATAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

• Response regulator receiver domain (Response_reg) (8-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	98.097	100	0.981
pilR	Pseudomonas aeruginosa PAK	50.98	97.04	0.495