Detailed information NTG0464045

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: JNE32_RS15470
• Genome accession: NZ_CP068982
• Coordinates: 2896000..2896605 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain pb2441
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2891000..2901605

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNE32_RS15440 (JNE32_15360)	-	2891813..2892202 (+)	390	WP_029727131.1	TIGR04086 family membrane protein	-
JNE32_RS15445 (JNE32_15365)	yajC	2892259..2892525 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
JNE32_RS15450 (JNE32_15370)	tgt	2892562..2893707 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
JNE32_RS15455 (JNE32_15375)	queA	2893734..2894762 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
JNE32_RS15460 (JNE32_15380)	yrzS	2894792..2894992 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
JNE32_RS15465 (JNE32_15385)	ruvB	2894985..2895989 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
JNE32_RS15470 (JNE32_15390)	ruvA	2896000..2896605 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
JNE32_RS15475 (JNE32_15395)	bofC	2896744..2897256 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
JNE32_RS15480 (JNE32_15400)	csbX	2897304..2898611 (-)	1308	WP_003246197.1	MFS transporter	-
JNE32_RS15485 (JNE32_15405)	iolG	2898682..2899707 (-)	1026	WP_029318179.1	inositol 2-dehydrogenase	-
JNE32_RS15490 (JNE32_15410)	yrzF	2899945..2900592 (+)	648	WP_003246159.1	phosphotransferase	-
JNE32_RS15495 (JNE32_15415)	-	2900638..2900760 (-)	123	WP_003229707.1	hypothetical protein	-
JNE32_RS15500	-	2900845..2900919 (+)	75	Protein_3021	hypothetical protein	-
JNE32_RS15505 (JNE32_15420)	-	2900923..2901291 (+)	369	WP_224912982.1	DUF5412 family protein	-
JNE32_RS15510 (JNE32_15425)	-	2901298..2901438 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=464045 JNE32_RS15470 WP_003229717.1 2896000..2896605(-) (ruvA) [Bacillus subtilis strain pb2441]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=464045 JNE32_RS15470 WP_003229717.1 2896000..2896605(-) (ruvA) [Bacillus subtilis strain pb2441]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCAGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408