Detailed information NTG0046338

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: SAA6159_RS07730
• Genome accession: NC_017338
• Coordinates: 1619549..1620046 (-)
• Length: 165 a.a.
• NCBI ID: WP_078055779.1
• Uniprot ID: -
• Organism: Staphylococcus aureus subsp. aureus JKD6159
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1614549..1625046

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAA6159_RS07705 (SAA6159_01470)	gcvPB	1614711..1616183 (-)	1473	WP_000202177.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-
SAA6159_RS07710 (SAA6159_01471)	gcvPA	1616176..1617522 (-)	1347	WP_000019682.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
SAA6159_RS07715 (SAA6159_01472)	gcvT	1617542..1618633 (-)	1092	WP_000093352.1	glycine cleavage system aminomethyltransferase GcvT	-
SAA6159_RS07720 (SAA6159_01473)	-	1618792..1619316 (-)	525	WP_001015120.1	shikimate kinase	-
SAA6159_RS07725 (SAA6159_03155)	-	1619306..1619452 (-)	147	WP_001789879.1	hypothetical protein	-
SAA6159_RS07730 (SAA6159_01474)	comGF	1619549..1620046 (-)	498	WP_078055779.1	competence type IV pilus minor pilin ComGF	Machinery gene
SAA6159_RS07735 (SAA6159_01475)	comGE	1619964..1620263 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
SAA6159_RS07740 (SAA6159_01476)	comGD	1620250..1620696 (-)	447	WP_014532765.1	competence type IV pilus minor pilin ComGD	Machinery gene
SAA6159_RS07745 (SAA6159_01477)	comGC	1620674..1620985 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
SAA6159_RS07750 (SAA6159_01478)	comGB	1620999..1622069 (-)	1071	WP_000776405.1	competence type IV pilus assembly protein ComGB	Machinery gene
SAA6159_RS07755 (SAA6159_01479)	comGA	1622041..1623015 (-)	975	WP_000697229.1	competence type IV pilus ATPase ComGA	Machinery gene
SAA6159_RS07760 (SAA6159_01480)	-	1623067..1623690 (-)	624	WP_001223005.1	MBL fold metallo-hydrolase	-
SAA6159_RS07765 (SAA6159_01481)	-	1623687..1624016 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
SAA6159_RS07770 (SAA6159_01482)	-	1624016..1625002 (-)	987	WP_000161306.1	ROK family glucokinase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19138.84 Da
• Isoelectric Point: 10.2877

>NTDB_id=46338 SAA6159_RS07730 WP_078055779.1 1619549..1620046(-) (comGF) [Staphylococcus aureus subsp. aureus JKD6159]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKAFLNESRELTTVDFEFFSRDI
LEDFKGVDRNDIEIRQQRIILHKGEEMIEFKLINNKIIKVVNDRGNITMLNNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=46338 SAA6159_RS07730 WP_078055779.1 1619549..1620046(-) (comGF) [Staphylococcus aureus subsp. aureus JKD6159]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTTATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAGCTTTTCTAAATGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAAAGGTGTAGATAGAAACGATATTGAAATTAGACAACAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATTCAAATTAATAAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGCTTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

• Putative Competence protein ComGF (ComGF) (63-155)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus MW2	95.758	100	0.958
comGF	Staphylococcus aureus N315	95.758	100	0.958