Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CQZ96_RS17280 Genome accession   NZ_CP058272
Coordinates   3682865..3683248 (+) Length   127 a.a.
NCBI ID   WP_004723803.1    Uniprot ID   A0A077L426
Organism   Acinetobacter sp. MYb10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3677865..3688248
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CQZ96_RS17265 (CQZ96_017295) - 3678918..3679877 (+) 960 WP_105714357.1 DUF6160 family protein -
  CQZ96_RS17270 (CQZ96_017300) - 3679974..3681689 (-) 1716 WP_105714356.1 proline--tRNA ligase -
  CQZ96_RS17275 (CQZ96_017305) - 3681939..3682580 (-) 642 WP_105714355.1 hypothetical protein -
  CQZ96_RS17280 (CQZ96_017310) pilG 3682865..3683248 (+) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  CQZ96_RS17285 (CQZ96_017315) - 3683274..3683642 (+) 369 WP_004723801.1 response regulator -
  CQZ96_RS17290 (CQZ96_017320) - 3683646..3684182 (+) 537 WP_004723799.1 chemotaxis protein CheW -
  CQZ96_RS17295 (CQZ96_017325) - 3684225..3686294 (+) 2070 WP_105714354.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14227.30 Da        Isoelectric Point: 4.7172

>NTDB_id=463376 CQZ96_RS17280 WP_004723803.1 3682865..3683248(+) (pilG) [Acinetobacter sp. MYb10]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=463376 CQZ96_RS17280 WP_004723803.1 3682865..3683248(+) (pilG) [Acinetobacter sp. MYb10]
ATGGACGATAAATTTCAAAATCTAAAAGTCATGGTGATCGATGATTCTAAAACCATTCGTCGTACTGCTGAAACATTATT
ACAAAGAGAAGGTTGTGAAGTTGTCACTGCTGTAGACGGTTTTGAAGCCTTATCTAAAATTGCTGAAGCAAATCCAGATA
TTGTTTTTGTCGATATCATGATGCCTCGTCTAGATGGCTACCAAACCTGCGCTTTGATTAAAAACTCCCAAAATTATCAA
AATATTCCAGTCATCATGTTATCTAGTAAAGATGGCTTATTTGATCAAGCAAAAGGTCGTGTTGTCGGTTCGGACGAATA
TTTAACAAAACCATTTAGTAAAGATGAACTATTAAATGCTATTCGCAATCATGTGACTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077L426

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.063

100

0.961
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37