Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   HW271_RS07280 Genome accession   NZ_CP058258
Coordinates   1483877..1484884 (-) Length   335 a.a.
NCBI ID   WP_178895456.1    Uniprot ID   -
Organism   Streptococcus sp. oral taxon 061 strain F0704     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1478877..1489884
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW271_RS07255 (HW271_07255) - 1479443..1479880 (-) 438 WP_178895451.1 Rrf2 family transcriptional regulator -
  HW271_RS07260 (HW271_07260) - 1479951..1480790 (-) 840 WP_178895452.1 metallophosphoesterase -
  HW271_RS07265 (HW271_07265) - 1480935..1481387 (+) 453 WP_178895453.1 universal stress protein -
  HW271_RS07270 (HW271_07270) - 1481417..1482808 (-) 1392 WP_178895454.1 Cof-type HAD-IIB family hydrolase -
  HW271_RS07275 (HW271_07275) - 1482874..1483836 (+) 963 WP_178895455.1 asparaginase -
  HW271_RS07280 (HW271_07280) ccpA 1483877..1484884 (-) 1008 WP_178895456.1 catabolite control protein A Regulator
  HW271_RS07285 (HW271_07285) - 1485088..1485405 (+) 318 WP_178895457.1 DUF960 domain-containing protein -
  HW271_RS07290 (HW271_07290) - 1485441..1486724 (-) 1284 WP_178895458.1 DUF308 domain-containing protein -
  HW271_RS07295 (HW271_07295) folK 1486708..1487538 (-) 831 WP_178895459.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  HW271_RS07300 (HW271_07300) folE 1487579..1488133 (-) 555 WP_178895460.1 GTP cyclohydrolase I FolE -
  HW271_RS07305 (HW271_07305) - 1488137..1489435 (-) 1299 WP_178895461.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -

Sequence


Protein


Download         Length: 335 a.a.        Molecular weight: 37143.29 Da        Isoelectric Point: 6.2674

>NTDB_id=463240 HW271_RS07280 WP_178895456.1 1483877..1484884(-) (ccpA) [Streptococcus sp. oral taxon 061 strain F0704]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKRTTTVGVVIPDITNTYFA
ALAKGIDDIAEMYKYNIVLANSDEDDEKEVAVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKNATADAVRHLLKRNKKIAFVSGPLVDDINGKVRLVGYKEALKEAGVNYSEGLVFESKYRYDDGYALAERLISSK
ATAAIVTGDELAAGLLNGLADHGISVPEDFEIITSDDSQIARYTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERKSTRKK

Nucleotide


Download         Length: 1008 bp        

>NTDB_id=463240 HW271_RS07280 WP_178895456.1 1483877..1484884(-) (ccpA) [Streptococcus sp. oral taxon 061 strain F0704]
ATGAACACAGATGATACAGTAACAATTTATGACGTTGCCCGAGAAGCAGGAGTTTCAATGGCAACAGTCAGTCGTGTAGT
CAATGGTAATAAGAATGTCAAAGAGAACACTCGTAAGAAAGTTCTAGAGGTTATTGAACGCCTAGACTATCGTCCCAATG
CAGTAGCTCGTGGCTTGGCAAGCAAACGAACAACAACTGTTGGTGTTGTCATTCCGGATATCACAAATACTTATTTCGCT
GCTCTGGCAAAAGGGATTGATGATATTGCCGAAATGTACAAATACAACATCGTCCTTGCTAATAGCGATGAGGATGATGA
AAAAGAAGTAGCAGTAGTCAACACACTCTTTTCAAAACAAGTCGATGGTATTATTTTTATGGGCTATCATTTGACAGAGA
AGATTCGTTCAGAGTTTTCACGTTCACGCACTCCTGTGGTTCTTGCAGGAACAGTGGATGTAGAACACCAGCTTCCAAGT
GTCAATATTGACTATAAGAATGCTACTGCGGATGCTGTTCGCCATTTGTTGAAACGTAACAAAAAGATTGCTTTTGTGAG
TGGTCCCTTAGTTGATGATATCAATGGTAAGGTTCGCTTGGTTGGATATAAGGAAGCTTTGAAAGAAGCTGGAGTCAACT
ATAGTGAAGGTCTTGTATTCGAATCAAAATATCGCTATGACGATGGTTATGCCTTGGCAGAACGCTTGATTTCTTCTAAA
GCAACAGCAGCTATTGTGACTGGTGATGAATTGGCGGCAGGTCTCTTGAATGGTTTGGCTGACCATGGCATTTCAGTACC
AGAAGACTTTGAAATCATTACAAGTGATGATTCTCAAATCGCACGCTATACTCGACCAAATTTGACAACTATCGCACAAC
CCTTGTATGACCTTGGTGCGATCAGTATGCGTATGTTGACGAAGATTATGCATAAGGAAGAATTGGAGGAACGTGAAGTT
CTTCTCCCTCACGGTTTGACAGAACGCAAATCAACTCGCAAAAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

89.552

100

0.896

  ccpA Streptococcus gordonii str. Challis substr. CH1

88.024

99.701

0.878

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

59.517

98.806

0.588