Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   HW271_RS04985 Genome accession   NZ_CP058258
Coordinates   1004593..1005402 (-) Length   269 a.a.
NCBI ID   WP_178895094.1    Uniprot ID   -
Organism   Streptococcus sp. oral taxon 061 strain F0704     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 999593..1010402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW271_RS04960 (HW271_04960) mscL 999727..1000104 (+) 378 WP_178895090.1 large conductance mechanosensitive channel protein MscL -
  HW271_RS04970 (HW271_04970) - 1000321..1002228 (-) 1908 WP_178895091.1 ABC-F family ATP-binding cassette domain-containing protein -
  HW271_RS04975 (HW271_04975) - 1002380..1004098 (+) 1719 WP_178895092.1 phospho-sugar mutase -
  HW271_RS04980 (HW271_04980) - 1004210..1004557 (+) 348 WP_178895093.1 PedC/BrcD family bacteriocin maturation disulfide isomerase -
  HW271_RS04985 (HW271_04985) vicX 1004593..1005402 (-) 810 WP_178895094.1 MBL fold metallo-hydrolase Regulator
  HW271_RS04990 (HW271_04990) micB 1005395..1006753 (-) 1359 WP_178895095.1 cell wall metabolism sensor histidine kinase VicK Regulator
  HW271_RS04995 (HW271_04995) micA 1006746..1007450 (-) 705 WP_178895096.1 response regulator YycF Regulator
  HW271_RS05000 (HW271_05000) mutY 1007518..1008675 (-) 1158 WP_178895097.1 A/G-specific adenine glycosylase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29901.81 Da        Isoelectric Point: 5.9877

>NTDB_id=463220 HW271_RS04985 WP_178895094.1 1004593..1005402(-) (vicX) [Streptococcus sp. oral taxon 061 strain F0704]
MSEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLGEINRKPEDLDAILITHEHADHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGNVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFQIYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=463220 HW271_RS04985 WP_178895094.1 1004593..1005402(-) (vicX) [Streptococcus sp. oral taxon 061 strain F0704]
ATGAGTGAAAAAGGCTTTAAATATAGTATTTTAGCATCGGGTTCTAGTGGAAATTCCTTCTATCTAGAAACCCCTAAGAA
AAAGATTTTAGTAGATGCAGGCTTATCCGGTAAAAAGATCACAAGTTTGTTGGGTGAAATCAATCGTAAACCAGAGGATT
TGGATGCTATCTTGATAACGCATGAACATGCTGACCATATCCACGGTGTTGGTGTTTTGGCACGTAAGTATGGCATGGAT
CTTTACGCAAATGAAAAGACCTGGCAAGCCATGGAAAATAGTAAGTATCTAGGCAATGTTGATTCTTCTCAAAAACATAT
CTTTGAAATGGGAAAAACTAAAACATTTGGAGATATCGACATTGAGAGTTTTGGAGTTAGCCATGATGCAGTTGCTCCCC
AATTCTACCGCTTTATGAAGGATGACAAGAGCTTTGTTATGCTGACGGATACAGGCTATGTTAGTGATCGTATGGCTGGC
ATTGTCGAGAATGCAGATGGTTACTTGATTGAGTCTAATCATGATGTGGAAATCCTGAGAGCTGGATCTTATGCTTGGCG
ACTCAAACAACGCATCCTGTCTGACCTTGGTCACCTCTCGAATGAAGATGGTGCAGATGCCATGATTCGTACACTAGGTA
ATCGTACCAAGAAGATTTACCTAGGACATCTATCTAAAGAGAATAATATCAAGGAGCTAGCCCACATGACCATGGTCAAT
CAGTTAGCTCAAGCAGATCTAGGAGTAGGAGTAGATTTTCAAATTTACGATACATCTCCAGACACTGCAACACCACTAAC
AGACATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.952

100

0.77