Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   HW271_RS03565 Genome accession   NZ_CP058258
Coordinates   727026..728993 (+) Length   655 a.a.
NCBI ID   WP_178894872.1    Uniprot ID   A0A7H8Z9D2
Organism   Streptococcus sp. oral taxon 061 strain F0704     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 722026..733993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW271_RS03550 (HW271_03550) - 722343..723161 (+) 819 WP_178894869.1 aminoglycoside 6-adenylyltransferase -
  HW271_RS03555 (HW271_03555) parC 723380..725857 (+) 2478 WP_178894870.1 DNA topoisomerase IV subunit A -
  HW271_RS03560 (HW271_03560) - 725982..727004 (+) 1023 WP_178894871.1 branched-chain amino acid aminotransferase -
  HW271_RS03565 (HW271_03565) amiA3 727026..728993 (+) 1968 WP_178894872.1 peptide ABC transporter substrate-binding protein Regulator
  HW271_RS03570 (HW271_03570) - 729028..729717 (+) 690 WP_178894873.1 5-oxoproline transporter, DUF969 family subunit -
  HW271_RS03575 (HW271_03575) - 729714..730637 (+) 924 WP_178894874.1 DUF979 domain-containing protein -
  HW271_RS03580 (HW271_03580) pcp 730651..731295 (+) 645 WP_178894875.1 pyroglutamyl-peptidase I -
  HW271_RS03585 (HW271_03585) - 731430..731660 (+) 231 WP_178894876.1 DUF2969 domain-containing protein -
  HW271_RS03600 (HW271_03600) rpsA 732030..733232 (+) 1203 WP_004253232.1 30S ribosomal protein S1 -
  HW271_RS03605 (HW271_03605) - 733318..733815 (+) 498 WP_178894877.1 GAF domain-containing protein -

Sequence

Protein


Download         Length: 655 a.a.        Molecular weight: 72778.32 Da        Isoelectric Point: 5.0004

>NTDB_id=463215 HW271_RS03565 WP_178894872.1 727026..728993(+) (amiA3) [Streptococcus sp. oral taxon 061 strain F0704]
MKTKKWMLTAGVVLSTAVLLVACGKADKEADAPTTFSYVYGVDPSSLDYSIATRTSTTDIIGNVVDGLLENDEYGNLVPS
LAEDWSVSQDGLTYTYKLRKGVKWYTSEGEEYAEVTAHDFVTGLKHVADGKSDGVTLIQNSIKGLNEYMTGETNDFSTVG
VKALDDYTVQYTLNAPESFWNSKVTSATMLPVNEEFLKASGKNYGAVSPSGILYNGPYILKTLTSKSLIEYEKNPNYWDK
EKVKIEKVKLTYYDGSDQESLIRSFSSGVYTTARIFPSSSNFASTLEQYGDKITYSPQDSTSYYFTFNVNRQSYNKTAKT
SEEQKTSTKEAMLNKDFRQAINFAFNRHSYAAQLNGEDGADKIIRNSLVPDNFVQSGGKNFGDIAQAELVNYGDQWKGVE
LVDGKDTIYNPDKAKASFEKAKKELEAKGVTFPIHLDVPVEQTDTIAVQQSNSFKQSIESTLGSENVVIDVLQMTDNEKE
SITSQARVPAQKDYDLNSTGWAPSYQDPASYLNIMDPKTGSAMKHLGITKGKDKEVVAQLGLYEYKKLLDDAVSETNDLD
KRYEKYAKAQAWLTDSSLLMPTASSGGSPVVSNIVPFSKPYSQVGIKGDPYIFKGMKLQKEIVSAKEYQAALEKWQKEKL
ESNNKYQKELESHVK

Nucleotide


Download         Length: 1968 bp        

>NTDB_id=463215 HW271_RS03565 WP_178894872.1 727026..728993(+) (amiA3) [Streptococcus sp. oral taxon 061 strain F0704]
ATGAAAACGAAAAAGTGGATGTTAACAGCAGGAGTTGTCCTGAGTACAGCAGTTCTTCTTGTGGCTTGTGGTAAAGCTGA
CAAGGAAGCAGACGCACCTACAACCTTCTCTTATGTCTATGGTGTAGACCCATCATCTTTGGACTACAGTATCGCAACTC
GTACTTCAACAACAGATATCATTGGTAACGTTGTTGATGGTTTGTTGGAAAATGACGAATACGGAAATTTGGTTCCATCT
CTAGCTGAGGATTGGAGCGTCTCACAAGACGGTTTGACTTATACTTATAAACTTCGAAAAGGGGTTAAATGGTATACTTC
AGAGGGTGAAGAATACGCTGAAGTAACTGCACATGACTTTGTTACTGGGTTGAAACACGTAGCAGATGGCAAATCAGACG
GTGTCACTCTTATTCAAAACTCCATCAAGGGCTTGAATGAATATATGACTGGTGAGACTAACGACTTCTCAACAGTTGGG
GTTAAGGCGTTGGACGATTACACAGTCCAGTATACTCTTAATGCACCTGAAAGTTTCTGGAATTCAAAAGTAACTTCAGC
AACTATGTTGCCGGTAAACGAGGAATTCCTCAAAGCTTCTGGTAAGAACTACGGAGCAGTAAGTCCATCTGGTATTCTTT
ATAACGGTCCATATATCTTGAAGACATTGACTTCAAAATCGTTAATCGAATACGAAAAGAATCCAAATTATTGGGATAAA
GAAAAGGTTAAAATTGAGAAAGTAAAATTGACCTATTATGATGGTTCTGACCAAGAATCATTGATCCGTAGCTTCTCTTC
AGGTGTTTATACAACAGCTCGTATCTTCCCAAGTAGTTCAAACTTTGCTTCTACTTTAGAGCAATACGGAGATAAAATCA
CATACAGTCCACAGGATTCAACTAGTTACTACTTTACCTTTAACGTAAACCGTCAATCTTATAATAAGACTGCGAAGACA
AGTGAAGAACAGAAAACTTCTACAAAAGAAGCAATGTTGAACAAGGACTTCCGTCAAGCAATCAACTTTGCCTTCAACCG
TCATTCATATGCTGCACAGCTTAACGGTGAAGATGGTGCGGATAAGATTATTCGTAACAGCCTAGTTCCAGATAACTTTG
TACAATCTGGTGGTAAAAACTTTGGTGATATTGCTCAAGCAGAATTGGTCAACTATGGAGACCAATGGAAAGGTGTTGAA
CTTGTAGACGGAAAAGATACTATCTATAATCCTGATAAAGCCAAAGCTTCATTTGAAAAAGCTAAGAAAGAATTGGAAGC
AAAAGGTGTAACCTTCCCAATTCACTTGGATGTTCCAGTTGAGCAAACAGATACAATTGCAGTTCAACAAAGCAATTCCT
TTAAACAATCAATTGAGTCAACTCTTGGTTCTGAAAATGTCGTGATTGACGTCCTTCAGATGACTGACAATGAAAAGGAA
AGTATTACATCACAAGCACGTGTTCCTGCTCAGAAAGACTATGACTTGAATAGTACTGGTTGGGCTCCAAGCTATCAAGA
CCCAGCAAGTTATCTAAATATCATGGATCCTAAGACTGGTTCTGCTATGAAACACCTTGGTATTACGAAAGGTAAAGACA
AGGAAGTAGTAGCTCAACTTGGTCTGTACGAATACAAGAAACTCTTGGATGATGCGGTTTCTGAGACAAATGACTTGGAC
AAGAGATATGAAAAATATGCCAAAGCGCAAGCATGGCTCACTGATAGTTCTCTCTTGATGCCAACAGCTTCATCAGGTGG
TTCACCAGTTGTTAGCAACATCGTTCCTTTCTCTAAACCATACTCACAAGTAGGTATTAAGGGTGACCCATATATCTTCA
AGGGTATGAAATTGCAAAAAGAGATTGTATCTGCTAAAGAATATCAAGCAGCTCTTGAAAAATGGCAAAAAGAAAAATTG
GAATCAAATAATAAATACCAAAAAGAATTAGAAAGTCATGTCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8Z9D2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

52.424

100

0.528
  amiA Streptococcus salivarius strain HSISS4

52.128

100

0.524
  amiA3 Streptococcus thermophilus LMG 18311

51.818

100

0.522