Detailed information NTG0046103

Bioinformatically predicted

Overview

• Name: ciaH
• Type: Regulator
• Locus tag: LILO_RS08570
• Genome accession: NC_020450
• Coordinates: 1799516..1800886 (-)
• Length: 456 a.a.
• NCBI ID: WP_042230545.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis IO-1
• Function: Required for optimal comC expression (predicted from homology) Competence regulation

Genomic Context

Location: 1794516..1805886

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LILO_RS08555 (lilo_1650)	-	1795688..1797121 (-)	1434	WP_021722126.1	6-phospho-beta-glucosidase	-
LILO_RS08560 (lilo_1651)	yidD	1797243..1797509 (-)	267	WP_015426859.1	membrane protein insertion efficiency factor YidD	-
LILO_RS08565 (lilo_1652)	-	1797626..1799368 (-)	1743	WP_015426860.1	1-deoxy-D-xylulose-5-phosphate synthase	-
LILO_RS08570 (lilo_1653)	ciaH	1799516..1800886 (-)	1371	WP_042230545.1	sensor histidine kinase	Regulator
LILO_RS08575 (lilo_1654)	ciaR	1800980..1801648 (-)	669	WP_021722129.1	response regulator transcription factor	Regulator
LILO_RS08580 (lilo_1655)	-	1801826..1802800 (-)	975	WP_015426862.1	LacI family DNA-binding transcriptional regulator	-
LILO_RS08585 (lilo_1656)	-	1802953..1805208 (-)	2256	WP_015426863.1	glycoside hydrolase family 65 protein	-

Sequence

Protein

• Length: 456 a.a.
• Molecular weight: 51417.98 Da
• Isoelectric Point: 9.4537

>NTDB_id=46103 LILO_RS08570 WP_042230545.1 1799516..1800886(-) (ciaH) [Lactococcus lactis subsp. lactis IO-1]
MKKIIKKIKSSAIVKNDGKNFLHFFLAFTVIFVALAVIIIQVMQLGMYRATDQNLHNLAQNRVFLEEAANNQLGTNNSQD
SGFYGPNNSVIFYDSEGKNFMPSTGSNANISTNFGMSLLQKAMKFNEKHINTIQTVSVKNPYGDNLHYRYYTTSQFIITN
SDGTVTPVYMQIFSNVDQIQDAMSRAMWVIVTTMITFWLLSIIISLYLANWTLRPILAAYEKQKEFVENASHELRTPLAI
LQNRLELLFQKPTATIIDESENISESLSEVRNMRLLTSNLLNLARRDSGIRIEPEATTATYFENIFNSYEMLAENAGKKF
SGHLKLDGTINLDQALIKQLLTILFDNALKYTGDEGEISVDVQKNGGFLVFAVADNGEGISDEDKKKIFDRFFRVDKART
RQKGGLGLGLSLAKQIVEAYNGKITVEDNKPKGTKFIVRIRVDSTISNPAKIFQKL

Nucleotide

• Length: 1371 bp

>NTDB_id=46103 LILO_RS08570 WP_042230545.1 1799516..1800886(-) (ciaH) [Lactococcus lactis subsp. lactis IO-1]
TTGAAGAAAATAATTAAAAAAATTAAATCTTCAGCTATTGTAAAAAATGATGGGAAAAATTTCCTTCATTTTTTTCTAGC
TTTTACAGTCATTTTTGTTGCTTTAGCCGTGATTATTATTCAAGTCATGCAATTAGGAATGTATCGAGCGACTGACCAAA
ATTTACACAATTTGGCTCAAAACCGAGTGTTTTTGGAAGAAGCAGCGAATAATCAATTAGGAACAAATAATTCACAAGAT
AGTGGCTTTTATGGACCAAATAATAGTGTAATTTTTTATGATTCAGAAGGAAAAAACTTTATGCCATCAACGGGCTCAAA
TGCAAATATAAGTACAAACTTTGGCATGAGTCTTTTGCAAAAAGCAATGAAATTTAATGAAAAACATATAAATACAATTC
AGACAGTATCTGTAAAAAATCCTTATGGAGATAATTTGCACTATCGTTATTACACAACATCGCAATTTATCATTACAAAT
TCAGATGGTACTGTGACGCCAGTTTATATGCAAATTTTTTCAAACGTTGACCAAATTCAAGATGCCATGAGCCGGGCCAT
GTGGGTCATTGTGACAACAATGATTACTTTCTGGCTACTATCAATAATTATTAGTCTATATCTTGCAAACTGGACTTTAA
GACCTATTCTGGCTGCTTATGAAAAACAAAAAGAATTTGTTGAAAATGCTTCACATGAATTGAGAACACCTCTGGCAATC
TTGCAAAATCGTCTAGAATTACTTTTCCAAAAGCCAACCGCAACAATTATTGATGAATCAGAAAATATTTCTGAAAGTTT
ATCAGAAGTTCGTAATATGCGTTTATTAACAAGTAACTTACTGAACTTAGCTCGTCGAGATTCTGGAATCAGAATTGAGC
CAGAGGCGACTACGGCAACTTATTTTGAGAATATTTTTAATAGCTATGAAATGCTTGCTGAAAACGCAGGTAAAAAGTTT
TCAGGCCATTTGAAATTAGATGGAACGATTAATTTGGACCAAGCCCTGATTAAACAATTGCTGACCATCTTATTTGATAA
TGCTCTTAAATACACGGGTGATGAGGGTGAAATCTCTGTAGATGTTCAAAAAAATGGGGGATTCTTAGTTTTTGCTGTCG
CCGATAATGGTGAAGGAATTTCTGATGAAGATAAGAAAAAAATCTTTGACCGCTTTTTCCGAGTAGATAAAGCAAGAACG
CGTCAAAAAGGTGGCTTAGGTTTGGGTCTTTCTCTGGCCAAACAAATTGTTGAAGCTTACAATGGGAAGATTACAGTTGA
AGATAATAAACCTAAAGGTACAAAATTCATTGTTAGAATTCGTGTGGATAGCACAATTTCAAATCCTGCAAAAATTTTCC
AAAAGTTGTAA

Domains

Predicted by InterProScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (223-289)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (333-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaH	Streptococcus mutans UA159	48.372	94.298	0.456
ciaH	Streptococcus pneumoniae Rx1	44.866	98.246	0.441
ciaH	Streptococcus pneumoniae D39	44.866	98.246	0.441
ciaH	Streptococcus pneumoniae R6	44.866	98.246	0.441
ciaH	Streptococcus pneumoniae TIGR4	44.866	98.246	0.441