Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | KSO_RS19040 | Genome accession | NC_020272 |
| Coordinates | 3898178..3898774 (-) | Length | 198 a.a. |
| NCBI ID | WP_003150697.1 | Uniprot ID | A7Z0E4 |
| Organism | Bacillus amyloliquefaciens IT-45 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 3893178..3903774
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KSO_RS19030 (KSO_019290) | - | 3897611..3897874 (-) | 264 | WP_003150686.1 | pro-sigmaK processing inhibitor BofA family protein | - |
| KSO_RS19035 (KSO_019295) | - | 3897935..3898159 (-) | 225 | WP_007408755.1 | YaaL family protein | - |
| KSO_RS19040 (KSO_019300) | recR | 3898178..3898774 (-) | 597 | WP_003150697.1 | recombination protein RecR | Machinery gene |
| KSO_RS19045 (KSO_019305) | - | 3898789..3899112 (-) | 324 | WP_003150700.1 | YbaB/EbfC family nucleoid-associated protein | - |
| KSO_RS19050 (KSO_019310) | dnaX | 3899137..3900828 (-) | 1692 | WP_003150701.1 | DNA polymerase III subunit gamma/tau | - |
| KSO_RS19055 (KSO_019315) | tadA | 3901310..3901792 (-) | 483 | WP_003150702.1 | tRNA adenosine(34) deaminase TadA | - |
| KSO_RS19060 (KSO_019320) | - | 3901914..3902426 (+) | 513 | WP_046376732.1 | cysteine hydrolase family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21990.53 Da Isoelectric Point: 5.3504
>NTDB_id=45997 KSO_RS19040 WP_003150697.1 3898178..3898774(-) (recR) [Bacillus amyloliquefaciens IT-45]
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
Nucleotide
Download Length: 597 bp
>NTDB_id=45997 KSO_RS19040 WP_003150697.1 3898178..3898774(-) (recR) [Bacillus amyloliquefaciens IT-45]
ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCGAAGCGGAATC
TGACATATTGCTCGATTTGCGGACATATTACAGATCAGGACCCTTGTTATATATGTGAGGACACAAGAAGAGATAAGTCT
GTTATTTGTGTCGTGCAGGACCCTAAGGATGTGATCGCGATGGAGAAAATGAAGGAATATAACGGCCAGTATCATGTTCT
TCACGGCGCGATTTCACCAATGGACGGCATCGGTCCGGAGGATATTAAGATTCCGGAGCTGCTGAAACGTCTTCAGGATG
ATCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAAGCAACAGCGATGTATATATCAAGGCTGTTA
AAGCCCTCAGGCATCAAGCTCTCCCGTATTGCCCACGGTCTGCCCGTCGGCGGTGATTTGGAATATGCTGATGAGGTCAC
TCTTTCAAAAGCTCTTGAAGGAAGACGTGAATTGTAA
ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCGAAGCGGAATC
TGACATATTGCTCGATTTGCGGACATATTACAGATCAGGACCCTTGTTATATATGTGAGGACACAAGAAGAGATAAGTCT
GTTATTTGTGTCGTGCAGGACCCTAAGGATGTGATCGCGATGGAGAAAATGAAGGAATATAACGGCCAGTATCATGTTCT
TCACGGCGCGATTTCACCAATGGACGGCATCGGTCCGGAGGATATTAAGATTCCGGAGCTGCTGAAACGTCTTCAGGATG
ATCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAAGCAACAGCGATGTATATATCAAGGCTGTTA
AAGCCCTCAGGCATCAAGCTCTCCCGTATTGCCCACGGTCTGCCCGTCGGCGGTGATTTGGAATATGCTGATGAGGTCAC
TCTTTCAAAAGCTCTTGAAGGAAGACGTGAATTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
98.99 |
100 |
0.99 |
| recR | Streptococcus pneumoniae R6 |
62.626 |
100 |
0.626 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.551 |
98.99 |
0.52 |