Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JHW37_RS01940 Genome accession   NZ_CP068238
Coordinates   407733..408140 (+) Length   135 a.a.
NCBI ID   WP_003148848.1    Uniprot ID   A0A2R3J4N2
Organism   Pseudomonas aeruginosa strain A39-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 402733..413140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHW37_RS01910 (JHW37_01910) - 402793..403797 (-) 1005 WP_003157750.1 aspartate carbamoyltransferase catalytic subunit -
  JHW37_RS01915 (JHW37_01915) pyrR 403821..404333 (-) 513 WP_003157749.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  JHW37_RS01920 (JHW37_01920) ruvX 404434..404868 (-) 435 WP_053816547.1 Holliday junction resolvase RuvX -
  JHW37_RS01925 (JHW37_01925) - 404868..405437 (-) 570 WP_053816548.1 YqgE/AlgH family protein -
  JHW37_RS01930 (JHW37_01930) - 405486..406379 (-) 894 WP_053816549.1 energy transducer TonB -
  JHW37_RS01935 (JHW37_01935) gshB 406525..407478 (-) 954 WP_012073999.1 glutathione synthase -
  JHW37_RS01940 (JHW37_01940) pilG 407733..408140 (+) 408 WP_003148848.1 twitching motility response regulator PilG Regulator
  JHW37_RS01945 (JHW37_01945) pilH 408187..408552 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  JHW37_RS01950 (JHW37_01950) - 408602..409138 (+) 537 WP_003148849.1 chemotaxis protein CheW -
  JHW37_RS01955 (JHW37_01955) pilJ 409224..411272 (+) 2049 WP_012074000.1 chemotaxis chemoreceptor PilJ -
  JHW37_RS01960 (JHW37_01960) pilK 411333..412208 (+) 876 WP_053816550.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14704.09 Da        Isoelectric Point: 7.1340

>NTDB_id=459196 JHW37_RS01940 WP_003148848.1 407733..408140(+) (pilG) [Pseudomonas aeruginosa strain A39-1]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPLDAAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=459196 JHW37_RS01940 WP_003148848.1 407733..408140(+) (pilG) [Pseudomonas aeruginosa strain A39-1]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACGCTGCT
TAAGAAGGTCGGTTGCGACGTGATCACGGCGATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCACCCGAACA
TCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGATCAAGAACAACAGTGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAACTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACTCCGCTGGACGCCG
CTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2R3J4N2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

42.063

93.333

0.393