Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilE   Type   Machinery gene
Locus tag   I6I87_RS03795 Genome accession   NZ_CP068109
Coordinates   826285..826830 (+) Length   181 a.a.
NCBI ID   WP_201665974.1    Uniprot ID   -
Organism   Moraxella osloensis strain FDAARGOS_1130     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 821285..831830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I87_RS03780 (I6I87_03780) - 824139..824708 (+) 570 WP_320407563.1 type IV pilin protein -
  I6I87_RS03785 (I6I87_03785) pilE 824708..825154 (+) 447 WP_201665970.1 type IV pilin protein Machinery gene
  I6I87_RS03790 (I6I87_03790) pilE 825535..826074 (+) 540 WP_201665972.1 pilin Machinery gene
  I6I87_RS03795 (I6I87_03795) pilE 826285..826830 (+) 546 WP_201665974.1 pilin Machinery gene
  I6I87_RS03800 (I6I87_03800) tfpZ 826855..827637 (+) 783 WP_320407564.1 TfpX/TfpZ family type IV pilin accessory protein -
  I6I87_RS03805 (I6I87_03805) - 827723..829522 (+) 1800 WP_201665976.1 PglL family O-oligosaccharyltransferase -
  I6I87_RS03810 (I6I87_03810) - 829522..830787 (+) 1266 WP_201665978.1 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase -
  I6I87_RS03815 (I6I87_03815) pseB 830827..831825 (+) 999 WP_201665981.1 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) -

Sequence

Protein


Download         Length: 181 a.a.        Molecular weight: 19266.19 Da        Isoelectric Point: 7.8697

>NTDB_id=458878 I6I87_RS03795 WP_201665974.1 826285..826830(+) (pilE) [Moraxella osloensis strain FDAARGOS_1130]
MSLHRGFTLIELMIVIAIIGMLVAIALPAYQAYTIRARISEGLNLAAYPKSLINETVVNRDSLTQIATMWNAQASGNGAT
SKFVNSVLLDGQTGVITITYNSQIVGVANNQNQLTLTPWIRDGVSNAGIGLSLYVAIAQSRTGSIDWGCASHTHMTADAA
GITIVPPTQPLMNYYAPAACR

Nucleotide


Download         Length: 546 bp        

>NTDB_id=458878 I6I87_RS03795 WP_201665974.1 826285..826830(+) (pilE) [Moraxella osloensis strain FDAARGOS_1130]
ATGTCACTACATCGAGGTTTTACTTTAATTGAGCTAATGATAGTCATCGCTATCATAGGTATGTTAGTGGCTATCGCTCT
ACCAGCGTATCAAGCCTATACTATAAGAGCGAGAATCTCTGAGGGACTAAATCTTGCTGCTTATCCCAAATCGTTGATTA
ACGAAACTGTAGTCAATCGTGATAGTCTCACGCAAATAGCCACTATGTGGAATGCCCAAGCAAGTGGGAATGGGGCTACC
TCAAAATTTGTTAATAGTGTATTATTAGATGGTCAGACAGGTGTTATTACTATTACTTACAACAGCCAAATTGTCGGTGT
TGCCAATAATCAAAATCAACTGACACTGACCCCATGGATTCGAGATGGTGTCAGTAATGCAGGTATTGGGCTATCATTGT
ATGTTGCGATTGCCCAAAGTAGAACAGGTAGTATTGATTGGGGCTGTGCGTCACATACTCATATGACGGCAGATGCCGCA
GGCATTACAATTGTACCACCGACCCAGCCATTAATGAATTATTATGCACCTGCAGCATGTCGCTAA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(1-27)

Pilin (bacterial filament) (Pilin)

(36-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Neisseria elongata subsp. glycolytica ATCC 29315

35.5

100

0.392
  pilA Ralstonia pseudosolanacearum GMI1000

36.898

100

0.381