Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilE   Type   Machinery gene
Locus tag   I6I87_RS03785 Genome accession   NZ_CP068109
Coordinates   824708..825154 (+) Length   148 a.a.
NCBI ID   WP_201665970.1    Uniprot ID   -
Organism   Moraxella osloensis strain FDAARGOS_1130     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 819708..830154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I87_RS03775 (I6I87_03775) - 820273..824130 (+) 3858 WP_201665968.1 pilus assembly protein PilY -
  I6I87_RS03780 (I6I87_03780) - 824139..824708 (+) 570 WP_320407563.1 type IV pilin protein -
  I6I87_RS03785 (I6I87_03785) pilE 824708..825154 (+) 447 WP_201665970.1 type IV pilin protein Machinery gene
  I6I87_RS03790 (I6I87_03790) pilE 825535..826074 (+) 540 WP_201665972.1 pilin Machinery gene
  I6I87_RS03795 (I6I87_03795) pilE 826285..826830 (+) 546 WP_201665974.1 pilin Machinery gene
  I6I87_RS03800 (I6I87_03800) tfpZ 826855..827637 (+) 783 WP_320407564.1 TfpX/TfpZ family type IV pilin accessory protein -
  I6I87_RS03805 (I6I87_03805) - 827723..829522 (+) 1800 WP_201665976.1 PglL family O-oligosaccharyltransferase -

Sequence

Protein


Download         Length: 148 a.a.        Molecular weight: 16181.29 Da        Isoelectric Point: 7.7731

>NTDB_id=458876 I6I87_RS03785 WP_201665970.1 824708..825154(+) (pilE) [Moraxella osloensis strain FDAARGOS_1130]
MKNRYSQQGFTLIELMIVVAIIGVLAAIAYPSYQRYVIKTKRTDMMTEMQNIASQIESRKLAQGSYTNAGTGLNGSFPRS
GTALYTITLAPTPLTERWTITATPVSSSQMANDGTLTLNAQGLKCRDKNNDGDTQDTGECGMANEWNN

Nucleotide


Download         Length: 447 bp        

>NTDB_id=458876 I6I87_RS03785 WP_201665970.1 824708..825154(+) (pilE) [Moraxella osloensis strain FDAARGOS_1130]
ATGAAAAATCGATATAGCCAGCAAGGCTTTACCCTAATCGAGCTGATGATTGTGGTTGCTATTATTGGTGTGCTGGCGGC
GATTGCTTATCCCAGTTATCAACGCTACGTCATCAAAACCAAACGCACTGATATGATGACAGAGATGCAAAATATCGCCT
CGCAAATTGAATCACGTAAACTGGCACAAGGCAGTTACACGAACGCAGGCACGGGATTAAATGGGAGCTTCCCTAGAAGT
GGTACAGCCTTGTATACCATCACCCTAGCACCTACTCCCCTAACTGAACGTTGGACAATTACAGCCACACCAGTTAGTTC
ATCGCAGATGGCAAATGATGGTACGCTCACTCTAAACGCGCAAGGGCTCAAATGTCGCGATAAAAATAATGATGGTGATA
CCCAAGATACAGGCGAATGCGGGATGGCGAATGAGTGGAATAACTAG

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(6-30)

Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS)

(31-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Acinetobacter baumannii D1279779

49.194

83.784

0.412
  comF Acinetobacter baylyi ADP1

48

84.459

0.405