Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   I6J15_RS07770 Genome accession   NZ_CP068056
Coordinates   1548519..1549181 (+) Length   220 a.a.
NCBI ID   WP_020916724.1    Uniprot ID   A0AB33ALM4
Organism   Streptococcus lutetiensis strain FDAARGOS_1158     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1543519..1554181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J15_RS07755 (I6J15_07755) - 1544409..1545230 (+) 822 WP_020916727.1 sugar phosphate isomerase/epimerase family protein -
  I6J15_RS07760 (I6J15_07760) - 1545682..1546434 (+) 753 WP_020916726.1 ABC transporter ATP-binding protein -
  I6J15_RS07765 (I6J15_07765) - 1546436..1548415 (+) 1980 WP_111712798.1 FtsX-like permease family protein -
  I6J15_RS07770 (I6J15_07770) braR 1548519..1549181 (+) 663 WP_020916724.1 DNA-binding response regulator Regulator
  I6J15_RS07775 (I6J15_07775) - 1549178..1550125 (+) 948 WP_020916723.1 sensor histidine kinase -
  I6J15_RS07780 (I6J15_07780) - 1550203..1550883 (+) 681 WP_111712797.1 XRE family transcriptional regulator -
  I6J15_RS07785 (I6J15_07785) xerS 1550991..1552061 (-) 1071 WP_111712796.1 tyrosine recombinase XerS Machinery gene
  I6J15_RS07790 (I6J15_07790) - 1552589..1552897 (-) 309 WP_061407755.1 ATP-binding cassette domain-containing protein -
  I6J15_RS09230 - 1552920..1553093 (-) 174 WP_004231642.1 hypothetical protein -
  I6J15_RS09235 - 1553236..1553412 (-) 177 WP_233422901.1 energy-coupling factor transporter transmembrane protein EcfT -
  I6J15_RS07800 (I6J15_07800) - 1553445..1553570 (+) 126 WP_020916719.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25417.19 Da        Isoelectric Point: 4.9563

>NTDB_id=458617 I6J15_RS07770 WP_020916724.1 1548519..1549181(+) (braR) [Streptococcus lutetiensis strain FDAARGOS_1158]
MKQGKIYIVEDDNTIVSLLKQHLSKVYDVYSVNNFRAIKQEIEEITPDLILMDITLPYFNGFYWTTEIRKTMTLPIIFIS
SSDDEMDTVMALNMGGDDFISKPFSLAILDAKISAFLRRAYQFTSDSYQLDEFSLSREGILSNGSKQINLSPTENKILSI
LFEHQNQVVPKEELLEKLWENESFIDQNTLSVNMTRLRKKVQPLGFDRIHTVRGVGYLLK

Nucleotide


Download         Length: 663 bp        

>NTDB_id=458617 I6J15_RS07770 WP_020916724.1 1548519..1549181(+) (braR) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGAAACAAGGAAAAATTTATATCGTAGAAGATGACAATACCATTGTATCCTTATTAAAACAGCATTTAAGCAAAGTTTA
TGATGTCTATAGTGTTAATAATTTTCGTGCGATTAAGCAAGAAATCGAAGAAATCACCCCGGATTTGATTCTAATGGATA
TCACTTTGCCCTATTTTAATGGTTTCTATTGGACGACTGAGATTCGTAAAACCATGACCTTGCCAATCATATTTATTTCA
TCCAGTGATGATGAAATGGATACCGTCATGGCATTGAATATGGGAGGAGATGATTTCATTTCTAAACCCTTCTCATTAGC
CATCTTAGATGCTAAGATATCAGCTTTTTTGCGCAGAGCTTATCAATTCACTTCTGACAGTTATCAACTCGATGAATTTT
CGTTATCCCGTGAAGGAATTCTATCAAATGGGAGTAAGCAAATTAATCTTTCTCCGACTGAAAACAAAATCCTTAGCATT
TTATTTGAACACCAAAATCAAGTGGTGCCAAAGGAAGAGCTGCTAGAGAAATTGTGGGAAAATGAAAGTTTTATTGACCA
AAACACCTTAAGTGTCAACATGACTCGTTTGCGCAAAAAAGTACAACCATTAGGATTTGATCGCATTCATACCGTGAGAG
GAGTCGGCTATCTTCTAAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-219)

Response regulator receiver domain (Response_reg)

(6-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AB33ALM4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.165

99.091

0.477
  vicR Streptococcus mutans UA159

34.783

100

0.364