Detailed information    

insolico Bioinformatically predicted

Overview


Name   hexA   Type   Machinery gene
Locus tag   I6J15_RS03590 Genome accession   NZ_CP068056
Coordinates   684087..686654 (+) Length   855 a.a.
NCBI ID   WP_058814330.1    Uniprot ID   -
Organism   Streptococcus lutetiensis strain FDAARGOS_1158     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 679087..691654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J15_RS03570 (I6J15_03570) - 679966..681384 (+) 1419 WP_111699143.1 prolyl oligopeptidase family serine peptidase -
  I6J15_RS03575 (I6J15_03575) argS 681432..683123 (-) 1692 WP_111713039.1 arginine--tRNA ligase -
  I6J15_RS03580 (I6J15_03580) argR 683313..683750 (+) 438 WP_020917601.1 arginine repressor -
  I6J15_RS03585 (I6J15_03585) - 683747..684100 (+) 354 WP_020917600.1 YlbF family regulator -
  I6J15_RS03590 (I6J15_03590) hexA 684087..686654 (+) 2568 WP_058814330.1 DNA mismatch repair protein MutS Machinery gene
  I6J15_RS03595 (I6J15_03595) hexB 686774..688714 (+) 1941 WP_020917598.1 DNA mismatch repair endonuclease MutL Machinery gene
  I6J15_RS03600 (I6J15_03600) ruvA 688715..689308 (+) 594 WP_020917597.1 Holliday junction branch migration protein RuvA Machinery gene
  I6J15_RS03605 (I6J15_03605) - 689338..689889 (+) 552 WP_058814328.1 DNA-3-methyladenine glycosylase I -
  I6J15_RS09020 - 690090..690317 (+) 228 WP_233422882.1 MFS transporter -

Sequence


Protein


Download         Length: 855 a.a.        Molecular weight: 95902.06 Da        Isoelectric Point: 4.9508

>NTDB_id=458574 I6J15_RS03590 WP_058814330.1 684087..686654(+) (hexA) [Streptococcus lutetiensis strain FDAARGOS_1158]
MAKDKISPGMQQYLDVKKDYPEAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNADNPIPMAGVPYHSAQQYIDVLV
EMGYKVAIAEQMEDPKQAVGVVKREVIQVITPGTAVDSSKPDNANNFLVAIDSDGKTFGLAYMDVSTGEFYATSLSDFTS
LKSEILNLKAREIVVGYDLSEDEQHSLVKQLNLLLSFEQERYEDVHLIDPNLTALEISAAEKLLQYVHTTQKRELSHLQK
LVHYEIKDYLQMSYTTKSSLDLLENARTSKKHGSLYWLLDETKTAMGMRLLRNWIDRPLVNQEQIEERQNIIQVFLDNFF
ERSDLTDSLKGVYDIERLASRVSFGKANPKDLLQLGHTLGQVPTIKAILESFDSPYLDKLVNSIDTLPELKSLISSAIDS
DAQAVITEGSIIRTGFDETLDKYRKVMREGTSWIAEIEAKERAASGITNLKIDYNKKDGYYFHVTNSNLSLVPDYFFRKA
TLKNSERFGTAELAKIEGEMLEAHEQSASLEYDIFMRVRAQVERYISRLQDLAKAISTVDVLQSLAVVAENNHYVRPTFN
NNHEIKIDKGRHAVVEKVMGTQEYIPNTITFGRNTNIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVAAESVSLPVFDA
IFTRIGAADDLISGQSTFMVEMMEANQAIKRASEKSLILFDELGRGTATYDGMALAQSIIEYIHDHIGAKTMFATHYHEL
TSLSTTLTHLVNVHVATLERNGDVTFLHKIAEGPADKSYGIHVAKIAGLPEDLLQRAGSILTNLESGAAQLHLTAETEEK
TQVKTEAAEPVAEQLSLFADDSSNQEVIEALKKVDLMNLTPMQAMNVIYELKNML

Nucleotide


Download         Length: 2568 bp        

>NTDB_id=458574 I6J15_RS03590 WP_058814330.1 684087..686654(+) (hexA) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGGCAAAAGATAAAATTTCTCCAGGCATGCAACAGTATTTGGATGTCAAAAAAGACTATCCAGAGGCTTTTTTACTTTT
CCGCATGGGAGACTTTTACGAACTATTTTATGATGACGCCGTTAAGGCGGCACAGATTTTAGAGATTAGTTTAACTAGTC
GTAATAAAAATGCTGACAATCCTATTCCGATGGCTGGTGTTCCTTATCATTCAGCCCAACAATACATTGATGTCTTGGTT
GAGATGGGGTATAAGGTTGCCATTGCTGAGCAGATGGAAGATCCGAAGCAGGCAGTGGGTGTGGTTAAGCGTGAAGTCAT
TCAGGTTATTACACCAGGGACAGCGGTTGATTCTTCTAAGCCAGATAATGCTAATAATTTCTTGGTAGCCATCGATTCAG
ATGGTAAAACTTTTGGTTTGGCATACATGGATGTGTCAACGGGTGAGTTTTACGCGACAAGTTTGTCTGATTTTACAAGC
CTAAAAAGTGAGATTTTAAATCTCAAGGCTCGTGAAATCGTGGTTGGTTATGACCTTTCTGAAGATGAGCAACACAGCTT
GGTTAAACAACTCAATCTCTTATTATCGTTTGAGCAAGAGCGCTATGAAGATGTGCATTTGATTGACCCTAATTTAACAG
CGTTAGAGATTTCTGCTGCTGAAAAATTACTTCAATACGTTCACACAACACAAAAACGTGAACTTAGTCACTTGCAAAAG
CTTGTTCACTATGAAATCAAAGACTATCTTCAAATGTCTTATACGACAAAATCAAGTCTTGATTTGCTAGAAAATGCCCG
TACTAGCAAGAAACACGGTAGTCTTTATTGGTTGCTTGATGAGACTAAAACTGCCATGGGGATGCGTTTGTTGCGTAACT
GGATTGATCGTCCATTGGTTAACCAAGAACAAATTGAAGAACGTCAAAATATTATTCAAGTTTTCTTAGACAACTTCTTT
GAACGTAGTGATTTGACGGACAGTCTAAAAGGTGTCTATGATATTGAACGTTTGGCTAGTCGCGTGTCATTTGGAAAAGC
CAATCCAAAAGATTTGCTTCAACTTGGTCACACTTTGGGGCAAGTGCCAACGATTAAAGCTATCTTGGAGTCTTTTGATA
GTCCGTACCTTGACAAGCTTGTCAACAGCATTGACACTTTACCAGAGCTAAAGTCATTGATTAGCTCTGCTATTGATTCA
GATGCTCAAGCGGTGATTACGGAAGGAAGTATTATCAGAACTGGTTTTGATGAGACTTTGGACAAATACCGTAAAGTCAT
GCGCGAAGGGACAAGCTGGATTGCTGAGATTGAAGCTAAAGAACGTGCGGCAAGTGGCATTACCAATCTAAAAATTGATT
ACAATAAAAAAGATGGCTATTATTTCCATGTCACAAATTCTAACCTTTCTTTGGTGCCAGATTACTTCTTCCGTAAAGCA
ACTTTGAAGAATTCAGAGCGTTTTGGTACAGCAGAATTGGCTAAAATTGAAGGTGAAATGCTAGAAGCGCATGAGCAATC
AGCGAGTCTGGAATACGATATTTTCATGCGTGTTCGCGCACAGGTGGAACGTTATATTTCACGTCTGCAAGATTTGGCAA
AAGCTATTTCTACAGTCGATGTTCTGCAAAGTTTGGCAGTGGTTGCGGAAAATAATCATTACGTGCGTCCAACTTTCAAC
AATAATCATGAAATTAAGATTGATAAAGGTCGCCATGCAGTTGTTGAAAAAGTCATGGGCACGCAAGAGTATATTCCAAA
TACCATTACATTTGGCAGAAATACCAATATTCAGCTGATTACTGGTCCAAATATGAGTGGTAAATCAACTTATATGCGTC
AGTTAGCTTTGACGGTTATCATGGCACAGATGGGGTCATACGTTGCTGCTGAGAGTGTTAGTCTTCCAGTTTTTGATGCG
ATTTTCACACGTATCGGTGCGGCGGATGATTTGATTTCAGGTCAGTCAACCTTCATGGTGGAAATGATGGAAGCCAACCA
AGCCATTAAACGTGCTAGTGAAAAATCTTTGATTCTCTTTGATGAATTGGGACGCGGGACAGCGACTTATGATGGAATGG
CTTTAGCACAATCTATCATTGAGTATATCCATGATCACATTGGTGCTAAGACCATGTTTGCGACTCACTATCATGAATTG
ACATCTCTGTCAACTACCTTGACACATCTTGTAAACGTCCATGTTGCAACGCTTGAACGTAATGGTGATGTGACTTTTCT
TCATAAAATCGCAGAAGGACCAGCTGACAAATCTTATGGTATTCACGTTGCGAAAATTGCAGGTTTGCCAGAAGATTTGT
TGCAACGAGCAGGTAGTATTTTAACCAATCTCGAATCAGGTGCTGCGCAGCTTCATTTGACAGCAGAAACTGAAGAGAAA
ACTCAAGTGAAGACAGAAGCGGCAGAACCTGTTGCAGAGCAGCTTAGCTTATTTGCAGATGACTCAAGTAACCAAGAAGT
GATTGAAGCTCTTAAAAAAGTGGACTTGATGAATCTAACACCAATGCAAGCCATGAATGTCATTTATGAATTGAAAAACA
TGTTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexA Streptococcus pneumoniae R6

72.047

100

0.72

  mutS Pseudomonas stutzeri strain ATCC 17587

37.228

100

0.38