Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | THTHE16_RS07085 | Genome accession | NC_017272 |
| Coordinates | 1342772..1343353 (+) | Length | 193 a.a. |
| NCBI ID | WP_008632866.1 | Uniprot ID | H7GH37 |
| Organism | Thermus thermophilus SG0.5JP17-16 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1337772..1348353
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| THTHE16_RS07060 (Ththe16_1386) | - | 1337851..1339302 (+) | 1452 | WP_014510579.1 | HD-GYP domain-containing protein | - |
| THTHE16_RS07065 (Ththe16_1387) | - | 1339353..1339844 (+) | 492 | WP_041445020.1 | DUF5317 family protein | - |
| THTHE16_RS07070 (Ththe16_1388) | - | 1339899..1340903 (+) | 1005 | WP_014510581.1 | homoisocitrate dehydrogenase | - |
| THTHE16_RS07075 (Ththe16_1389) | pilM | 1341033..1342166 (+) | 1134 | WP_014510582.1 | type IV pilus assembly protein PilM | Machinery gene |
| THTHE16_RS07080 (Ththe16_1390) | pilN | 1342159..1342782 (+) | 624 | WP_014510583.1 | competence protein | Machinery gene |
| THTHE16_RS07085 (Ththe16_1391) | pilO | 1342772..1343353 (+) | 582 | WP_008632866.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| THTHE16_RS07090 (Ththe16_1392) | pilW | 1343350..1344228 (+) | 879 | WP_014510585.1 | hypothetical protein | Machinery gene |
| THTHE16_RS07095 (Ththe16_1393) | pilQ | 1344225..1346492 (+) | 2268 | WP_014510586.1 | secretin N-terminal domain-containing protein | Machinery gene |
| THTHE16_RS07100 (Ththe16_1394) | aroC | 1346551..1347702 (+) | 1152 | WP_008632875.1 | chorismate synthase | - |
| THTHE16_RS07105 (Ththe16_1395) | - | 1347727..1348281 (+) | 555 | WP_008632876.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21310.61 Da Isoelectric Point: 6.4566
>NTDB_id=45784 THTHE16_RS07085 WP_008632866.1 1342772..1343353(+) (pilO) [Thermus thermophilus SG0.5JP17-16]
MLARLGQREWALLAMVLTALLGLLWYYLLIVPTRQEIATVRQEIDRLTIERNRGLQAQRALPELRATIAALQAQRLAFLR
ALPREERLAEVLSEVLQDAEASGVVVRSFTRSRTSAPVPEVRAVNLALALEAPFPETYAYLRRLEDLSRFSTLSGLNLSV
QSQEANPTLATGLTLTVYVLAQGVEAETGGSTP
MLARLGQREWALLAMVLTALLGLLWYYLLIVPTRQEIATVRQEIDRLTIERNRGLQAQRALPELRATIAALQAQRLAFLR
ALPREERLAEVLSEVLQDAEASGVVVRSFTRSRTSAPVPEVRAVNLALALEAPFPETYAYLRRLEDLSRFSTLSGLNLSV
QSQEANPTLATGLTLTVYVLAQGVEAETGGSTP
Nucleotide
Download Length: 582 bp
>NTDB_id=45784 THTHE16_RS07085 WP_008632866.1 1342772..1343353(+) (pilO) [Thermus thermophilus SG0.5JP17-16]
GTGCTCGCTAGGCTGGGACAGCGGGAGTGGGCCCTCCTGGCCATGGTCCTCACCGCCCTCCTGGGGCTCCTCTGGTACTA
CCTGCTCATCGTGCCCACAAGGCAGGAGATCGCCACCGTCCGGCAGGAGATTGACCGCCTCACCATAGAGCGCAACCGCG
GGCTCCAGGCCCAGCGGGCCCTTCCCGAGCTCCGCGCCACCATCGCCGCCCTCCAAGCCCAAAGGCTCGCCTTCCTCCGG
GCCCTGCCCCGGGAGGAAAGGCTCGCCGAGGTCCTCTCCGAGGTGCTCCAGGACGCGGAGGCGAGCGGGGTGGTGGTCCG
AAGCTTCACCCGAAGCCGCACCTCGGCCCCGGTGCCCGAGGTGCGGGCCGTGAACCTGGCCCTGGCCCTCGAGGCCCCCT
TCCCCGAGACCTACGCCTACCTGCGGCGCCTGGAGGACCTCTCCCGCTTCAGCACCCTTTCCGGCCTCAACCTGAGCGTC
CAGAGCCAGGAAGCGAACCCCACCCTCGCCACCGGCCTCACCTTGACCGTCTACGTGCTGGCCCAGGGGGTGGAGGCGGA
AACGGGAGGGAGCACCCCATGA
GTGCTCGCTAGGCTGGGACAGCGGGAGTGGGCCCTCCTGGCCATGGTCCTCACCGCCCTCCTGGGGCTCCTCTGGTACTA
CCTGCTCATCGTGCCCACAAGGCAGGAGATCGCCACCGTCCGGCAGGAGATTGACCGCCTCACCATAGAGCGCAACCGCG
GGCTCCAGGCCCAGCGGGCCCTTCCCGAGCTCCGCGCCACCATCGCCGCCCTCCAAGCCCAAAGGCTCGCCTTCCTCCGG
GCCCTGCCCCGGGAGGAAAGGCTCGCCGAGGTCCTCTCCGAGGTGCTCCAGGACGCGGAGGCGAGCGGGGTGGTGGTCCG
AAGCTTCACCCGAAGCCGCACCTCGGCCCCGGTGCCCGAGGTGCGGGCCGTGAACCTGGCCCTGGCCCTCGAGGCCCCCT
TCCCCGAGACCTACGCCTACCTGCGGCGCCTGGAGGACCTCTCCCGCTTCAGCACCCTTTCCGGCCTCAACCTGAGCGTC
CAGAGCCAGGAAGCGAACCCCACCCTCGCCACCGGCCTCACCTTGACCGTCTACGTGCTGGCCCAGGGGGTGGAGGCGGA
AACGGGAGGGAGCACCCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Thermus thermophilus HB27 |
98.964 |
100 |
0.99 |