Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilA1 | Type | Machinery gene |
| Locus tag | THTHE16_RS06265 | Genome accession | NC_017272 |
| Coordinates | 1183446..1183916 (+) | Length | 156 a.a. |
| NCBI ID | WP_014510470.1 | Uniprot ID | F6DHL3 |
| Organism | Thermus thermophilus SG0.5JP17-16 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1178446..1188916
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| THTHE16_RS06245 (Ththe16_1225) | ilvC | 1178945..1179958 (-) | 1014 | WP_014510467.1 | ketol-acid reductoisomerase | - |
| THTHE16_RS06250 (Ththe16_1226) | ilvN | 1179955..1180467 (-) | 513 | WP_041444882.1 | acetolactate synthase small subunit | - |
| THTHE16_RS06255 (Ththe16_1227) | ilvB | 1180464..1182152 (-) | 1689 | WP_014510469.1 | biosynthetic-type acetolactate synthase large subunit | - |
| THTHE16_RS06260 (Ththe16_1228) | - | 1182308..1183288 (-) | 981 | WP_008631297.1 | YpdA family putative bacillithiol disulfide reductase | - |
| THTHE16_RS06265 (Ththe16_1229) | pilA/pilA1 | 1183446..1183916 (+) | 471 | WP_014510470.1 | GspH/FimT family protein | Machinery gene |
| THTHE16_RS06270 (Ththe16_1230) | - | 1183972..1184445 (+) | 474 | WP_014510471.1 | GspH/FimT family pseudopilin | - |
| THTHE16_RS06275 (Ththe16_1231) | pilA/pilA2 | 1184442..1184999 (+) | 558 | WP_014510472.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| THTHE16_RS06280 (Ththe16_1232) | pilA/pilA3 | 1184996..1185700 (+) | 705 | WP_014510473.1 | PilW family protein | Machinery gene |
| THTHE16_RS06285 (Ththe16_1233) | comZ | 1185711..1187426 (+) | 1716 | WP_014510474.1 | pilus assembly PilX N-terminal domain-containing protein | Machinery gene |
| THTHE16_RS12275 (Ththe16_1234) | - | 1187666..1188073 (+) | 408 | WP_014510475.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| THTHE16_RS06295 (Ththe16_1235) | - | 1188242..1188439 (+) | 198 | WP_018461701.1 | nucleotidyltransferase family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 16898.69 Da Isoelectric Point: 10.9666
>NTDB_id=45778 THTHE16_RS06265 WP_014510470.1 1183446..1183916(+) (pilA/pilA1) [Thermus thermophilus SG0.5JP17-16]
MTRRGLTLLELLLVLGILGVLLGLALPLLSPNRLALDQAARSLATQVTRARLEAIRQNAFVGLHAFTEGAGGYLLFVDRN
ANRGYDPGEEFGATRFGQGDWARVRLDPEKSILGNMPLLFDPRGIPAKPITATLVLTSGDAIRKVVISQQGRARLE
MTRRGLTLLELLLVLGILGVLLGLALPLLSPNRLALDQAARSLATQVTRARLEAIRQNAFVGLHAFTEGAGGYLLFVDRN
ANRGYDPGEEFGATRFGQGDWARVRLDPEKSILGNMPLLFDPRGIPAKPITATLVLTSGDAIRKVVISQQGRARLE
Nucleotide
Download Length: 471 bp
>NTDB_id=45778 THTHE16_RS06265 WP_014510470.1 1183446..1183916(+) (pilA/pilA1) [Thermus thermophilus SG0.5JP17-16]
ATGACTCGGCGGGGCCTTACCCTTTTGGAGCTCCTGCTGGTCTTGGGCATCCTGGGGGTCCTCCTAGGGCTGGCCCTTCC
ACTTCTTTCCCCCAACCGCCTCGCCCTGGACCAGGCCGCCCGCTCCCTCGCCACCCAGGTGACCCGGGCAAGGCTCGAGG
CCATCCGGCAAAACGCCTTCGTGGGCCTGCACGCCTTCACCGAGGGCGCCGGGGGCTACCTTCTCTTCGTGGACCGTAAC
GCCAACCGCGGCTATGACCCCGGGGAGGAGTTCGGCGCGACCCGCTTCGGCCAAGGGGACTGGGCCCGGGTGCGCCTGGA
CCCGGAGAAGAGCATCCTCGGCAACATGCCCCTTCTCTTTGATCCCCGGGGCATCCCGGCCAAGCCCATCACCGCCACCC
TGGTCCTCACCTCAGGGGACGCCATCCGCAAGGTGGTCATCTCCCAGCAGGGCCGGGCCCGCCTGGAGTGA
ATGACTCGGCGGGGCCTTACCCTTTTGGAGCTCCTGCTGGTCTTGGGCATCCTGGGGGTCCTCCTAGGGCTGGCCCTTCC
ACTTCTTTCCCCCAACCGCCTCGCCCTGGACCAGGCCGCCCGCTCCCTCGCCACCCAGGTGACCCGGGCAAGGCTCGAGG
CCATCCGGCAAAACGCCTTCGTGGGCCTGCACGCCTTCACCGAGGGCGCCGGGGGCTACCTTCTCTTCGTGGACCGTAAC
GCCAACCGCGGCTATGACCCCGGGGAGGAGTTCGGCGCGACCCGCTTCGGCCAAGGGGACTGGGCCCGGGTGCGCCTGGA
CCCGGAGAAGAGCATCCTCGGCAACATGCCCCTTCTCTTTGATCCCCGGGGCATCCCGGCCAAGCCCATCACCGCCACCC
TGGTCCTCACCTCAGGGGACGCCATCCGCAAGGTGGTCATCTCCCAGCAGGGCCGGGCCCGCCTGGAGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilA1 | Thermus thermophilus HB27 |
92.126 |
81.41 |
0.75 |